Table 2 Viable microorganisms recovered from flight and control samples.

From: Sierra Nevada sweep: metagenomic measurements of bioaerosols vertically distributed across the troposphere

Category

Environment

Genera identified

Flight samples

10,000 ft Filter A

NA

10,000 ft Filter B

NA

20,000 ft Filter A

Bacillus zhangzhouensis5*,+, Bacillus pumilus1 +

20,000 ft Filter B

NA

30,000 ft Filter A

Bacillus zhangzhouensis2, Bacillus spp.2 ^

30,000 ft Filter B

NA

40,000 ft Filter A

NA

40,000 ft Filter B

Streptococcus sp.1 ^, Streptomyces spp.2 ^

Ground control

Pre-flight plane swab

Bacillus subtilis4 +, Bacillus pumilus3 +, Bacillus megaterium3 +, Bacillus zhangzhouensis1 +, Bacillus safensis1 +, Bacillus spp.8, Bacillus licheniformis3 +, Bacillus halotolerans1 +, Lysinibacillus sinduriesis1 +, Methylorubrum zatmanii2 ^, Lysinibacillus sp1. +

Post-flight plane swab

Bacillus spp. 2 +, Bacillus zhangzhouensis6

Cabin control

Bench swab+

Bacillus subtilis3, Bacillus safensis1, Bacillus maritimus1, Lysinibacillus sphaericus1, Lysinibacillus acetophenoni1

Witness R2A plate

Pseudomonas syringae1+, Microvirga#,$ 1 +, Methylorubrum populi$ 1 +, Cellulomonas cellasea 1 +, Streptococcus sp 1 ^, Agromyces# sp 1^, Planomicrobium glaciei$ 1+, Staphylococcus epidermidis 2+, Bacillus licheniformis2 ^, Citrococcus sp. 1 ^, Bacillus paralicheniformis1^

Process control&

PBS elution fluid control

Bacillus zhangzhouensis 1, Bacillus sp. 1

  1. *The number in brackets indicates number of isolates matching the genus and/or species.
  2. #Designates query lengths < 1,000 nt.
  3. $Query sequence had < 95% identity to database match.
  4. +Isolates from June 20, 2018 sampling only.
  5. ^Isolates from June 21, 2018 sampling only.
  6. &Control sample taken in lab July 2018.