Table 3 Number of sequences of the “Top 50 Most Wanted Fungi” assigned/classified (a/c) by BLAST, RDP, CNN, and DBN, and assigned by both BLAST and RDP, BLAST and CNN, BLAST and DBN with the same and different names.
From: Convolutional neural networks improve fungal classification
Level | Species | Genus | Family | Order | Class |
|---|---|---|---|---|---|
BLAST | 1 | 17 | 207 | 295 | 337 |
RDP (assigned/classified) | 0/93 | 3/630 | 9/500 | 13/1775 | 8/1806 |
Same assign. by RDP&BLAST | 0 | 3 | 6 | 9 | 8 |
Diff. assign. by RDP&BLAST | 0 | 0 | 3 | 4 | 0 |
RDP/BLAST | 0 | 0 | 0 | 0 | 0 |
BLAST/RDP | 1 | 14 | 198 | 282 | 329 |
CNN (assigned/classified) | 1/281 | 4/440 | 87/1546 | 153/1775 | 224/1708 |
Same assign. by CNN&BLAST | 1 | 4 | 51 | 121 | 187 |
Diff. assign. by CNN&BLAST | 0 | 0 | 19 | 17 | 16 |
CNN/BLAST | 0 | 0 | 17 | 15 | 21 |
BLAST/CNN | 0 | 13 | 137 | 157 | 134 |
DBN (assigned/classified) | 0/230 | 1/335 | 10/450 | 50/815 | 80/1,377 |
Same assign. by DBN&BLAST | 0 | 1 | 6 | 43 | 68 |
Diff. assign. by DBN&BLAST | 0 | 0 | 4 | 7 | 12 |
DBN/BLAST | 0 | 0 | 0 | 0 | 0 |
BLAST/DBN | 1 | 17 | 197 | 245 | 257 |
