Figure 6

Photosynthesis involved in pod development. (A) MapMan photosynthesis overview maps showing differences at the transcript level between aerial pods (P0) and subterranean developing seeds. Log2 ratios for average transcript abundance in seed across stages P2SD to P10SD were calculated. (B) MapMan photosynthesis overview maps showing differences at the transcript level between aerial pods (P0) and subterranean shell tissue. (C) PageMan display of coordinated changes of photosynthesis during pod development. In (b) and (c), the logarithmic color scales from − 3 to 3, green represents significantly higher expression in aerial pods compared with subterranean pods, and red represents significantly higher expression in subterranean pods compared with aerial pods. Red indicates significant enrichment of up-regulated transcripts; and blue indicates significant depletion of up-regulated transcripts.