Table 1 Specimen description and LTR subtype assignment.

From: Genetic variability of the U5 and downstream sequence of major HIV-1 subtypes and circulating recombinant forms

County of origin

Primary genotype

LTR subtype

Total

B

C

D

F2

12_BF

A1

G

02_AG

01_AE

USA, France, Spain, Japan, China, Venezuela, Bolivia

B

20

   

5

    

25

South Africa, Malawi, India

C

 

8

       

8

Uganda, Cameroon

D

  

10

      

10

Spain

F1

   

1

     

1

Cameroon

F2

   

3

     

3

Rwanda, Kenya, Uganda, Russia, Spain, Tanzania

A1

     

10

   

10

Cameroon, Kenya, Spain

G

      

3

  

3

Cameroon, Kenya, Spain

02_AG

   

1

   

9

 

10

China

01_AE

        

5

5

Cameroon

22_01A1

        

5

5

  1. B = Subtype B; C = Subtype C; D = Subtype D; F1 = Subtype F1; F2 = Subtype F2; A1 = Subtype A1; G = Subtype G; BF = CRF12_BF; AG = CRF02_AG; AE = CRF01_AE; 01A1 = CRF22_01A1.
Back to article page