Table 3 Putative immune genes in the hepatopancreas transcriptome of S. paramamosain.
From: Hepatopancreas immune response during molt cycle in the mud crab, Scylla paramamosain
Peptide families | Accession Num | Size(bp)/ (aa) | Best blastx match | |||
|---|---|---|---|---|---|---|
Species name | E-value | Ident | Accession Num | |||
Antimicrobial peptides (AMPs) | ||||||
Crustin antimicrobial peptide | c17146.graph_c0 | 557/185 | Scylla paramamosain | 5e-60 | 100% | ABY20728.1 |
Sphyastatin | c34929.graph_c0 | 742/247 | Scylla paramamosain | 2e-77 | 100% | AFY10070.1 |
Lysozyme | c32013.graph_c0 | 942/314 | Scylla paramamosain | 2e-153 | 99.55% | ADM33942.1 |
Inflammatory gene | ||||||
Interleukin-16-like protein | c54350.graph_c0 | 6,041/2013 | Eriocheir sinensis | 0.0 | 90% | AWM96383.1 |
Prophenol/phenol oxidase cascade | ||||||
Trypsin-like serine proteinase | c23984.graph_c0 | 1,011/337 | Eriocheir sinensis | 5e-77 | 52% | AKN46052.1 |
Trypsin-1-like | c32762.graph_c0 | 2,320/773 | Acromyrmex echinatior | 3e-37 | 36% | XP_011063347.1 |
Alpha2 macroglobulin isoform 3, partial | c80987.graph_c0 | 463/154 | Penaeus chinensis | 9e-16 | 59% | ACU31809.1 |
Toll signaling pathway | ||||||
Toll-like receptor | c49018.graph_c0 | 4,265/1,421 | Procambarus clarkii | 0.0 | 50.28% | AJE28352.1 |
Antioxidant enzymes | ||||||
Catalase | c60548.graph_c0 | 3,312/1,104 | Scylla paramamosain | 0.0 | 100% | ACX46120.1 |
Thioredoxin 2 | c29838.graph_c0 | 1674/558 | Portunus trituberculatus | 5e-72 | 98% | AFE88627.1 |
Metal-binding proteins | ||||||
Zinc proteinase Mpc1 | c69961.graph_c0 | 258/86 | Litopenaeus vannamei | 2e-120 | 79% | DQ398567.1 |
Ferritin | c42424.graph_c0 | 1,251/417 | Scylla paramamosain | 1e-188 | 99% | ADM26622.1 |
Other immune factors | ||||||
Macrophage migration inhibitory factor MIF1 | c37813.graph_c0 | 394/131 | Scylla paramamosain | 7e-73 | 100% | AKT09427.1 |
Cathepsin L | c75535.graph_c0 | 369/123 | Eriocheir sinensis | 3e-40 | 87% | ADO65978.1 |
C-type lectin | c10960.graph_c0 | 712/237 | Eriocheir sinensis | 5e-54 | 50% | ADH43623.1 |
C-type lectin 2 | c76885.graph_c0 | 384/128 | Scylla paramamosain | 4e-53 | 63% | AEO92002.1 |
Hemocyanin subunit 1 | c27342.graph_c0 | 797/265 | Scylla paramamosain | 8e-140 | 77% | AKC96433.1 |
Hemocyanin subunit 3 | c94743.graph_c0 | 226/75 | Scylla paramamosain | 2e-44 | 99% | AKC96431.1 |
