Table 1 List of Colletotrichum spp. associated with strawberry anthracnose in Taiwan.
Species | Isolatea | Strawberry tissue | Collection date | Sampling site | GenBank accession numberb | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
ITS | GAPDH | CHS1 | ACT | TUB2 | CAL | ApMAT | ||||||
C. acutatum species complex | ||||||||||||
| Â | C. miaoliense sp. nov | ML1040 | crown | 2016/10/28 | Shitan Township, Miaoli County | MK908419 | MK908470 | MK908522 | MK908573 | MK908624 | -c | - |
| Â | Â | ML1042 | leaf | 2016/11/24 | Renai Township, Nantou County | MK908420 | MK908471 | MK908523 | MK908574 | MK908625 | - | - |
| Â | Â | ML1794 | leaf | 2018/07/04 | Renai Township, Nantou County | MK908421 | MK908472 | MK908524 | MK908575 | MK908626 | - | - |
C. boninense species complex | ||||||||||||
| Â | C. boninense | ML521 | leaf | 2013/01/21 | Taian Township, Miaoli County | MK908424 | MK908475 | MK908527 | MK908578 | MK908629 | MK908677 | - |
| Â | C. karstii | ML351 | leaf | 2012/07/06 | Shitan Township, Miaoli County | MK908422 | MK908473 | MK908525 | MK908576 | MK908627 | MK908675 | - |
| Â | Â | ML442 | leaf | 2012/07/04 | Nanchuang Township, Miaoli County | MK908423 | MK908474 | MK908526 | MK908577 | MK908628 | MK908676 | - |
| Â | Â | ML1792 | leaf | 2018/05/16 | Renai Township, Nantou County | MK908425 | MK908476 | MK908528 | MK908579 | MK908630 | MK908678 | - |
C. gloeosporioides species complex | ||||||||||||
| Â | C. fructicola | ML348 | leaf | 2012/07/06 | Shitan Township, Miaoli County | MK908461 | MK908513 | MK908564 | MK908615 | MK908666 | MK908714 | MK908758 |
| Â | Â | ML353 | root | 2012/07/10 | Shitan Township, Miaoli County | MK908462 | MK908514 | MK908565 | MK908616 | MK908667 | MK908715 | MK908759 |
| Â | Â | ML356 | crown | 2012/07/10 | Shitan Township, Miaoli County | MK908463 | MK908515 | MK908566 | MK908617 | MK908668 | MK908716 | MK908760 |
| Â | Â | ML368 | stolon | 2012/07/24 | Dahu Township, Miaoli County | MK908464 | MK908516 | MK908567 | MK908618 | MK908669 | MK908717 | MK908761 |
| Â | Â | ML818 | crown | 2016/07/06 | Renai Township, Nantou County | MK908468 | MK908520 | MK908571 | MK908622 | MK908673 | MK908721 | MK908765 |
| Â | Â | ML1012 | leaf | 2016/11/09 | Renai Township, Nantou County | MK908469 | MK908521 | MK908572 | MK908623 | MK908674 | MK908722 | MK908766 |
| Â | C. siamense | ML040 | fruit | 2010/03/22 | Gongguan Township, Miaoli County | MK908426 | MK908477 | MK908529 | MK908580 | MK908631 | MK908679 | MK908723 |
| Â | Â | ML041 | fruit | 2010/03/24 | Dahu Township, Miaoli County | MK908427 | MK908478 | MK908530 | MK908581 | MK908632 | MK908680 | MK908724 |
| Â | Â | ML048 | fruit | 2010/05/12 | Dahu Township, Miaoli County | MK908428 | MK908479 | MK908531 | MK908582 | MK908633 | MK908681 | MK908725 |
| Â | Â | ML076 | stolon | 2010/08/27 | Dahu Township, Miaoli County | MK908429 | MK908480 | MK908532 | MK908583 | MK908634 | MK908682 | MK908726 |
| Â | Â | ML133 | crown | 2011/10/28 | Dahu Township, Miaoli County | MK174223 | MK908481 | MK174224 | MK174225 | MK174226 | MK174227 | MK174228 |
| Â | Â | ML177 | fruit | 2012/03/09 | Dahu Township, Miaoli County | MK908430 | MK908482 | MK908533 | MK908584 | MK908635 | MK908683 | MK908727 |
| Â | Â | ML275 | crown | 2012/06/04 | Dahu Township, Miaoli County | MK908431 | MK908483 | MK908534 | MK908585 | MK908636 | MK908684 | MK908728 |
| Â | Â | ML284 | crown | 2012/06/04 | Shitan Township, Miaoli County | MK908432 | MK908484 | MK908535 | MK908586 | MK908637 | MK908685 | MK908729 |
| Â | Â | ML293 | root | 2012/4/25 | Guanxi Township, Hsinchu County | MK908433 | MK908485 | MK908536 | MK908587 | MK908638 | MK908686 | MK908730 |
| Â | Â | ML294 | crown | 2012/06/13 | Dahu Township, Miaoli County | MK908434 | MK908486 | MK908537 | MK908588 | MK908639 | MK908687 | MK908731 |
| Â | Â | ML296 | crown | 2012/06/13 | Dahu Township, Miaoli County | MK908435 | MK908487 | MK908538 | MK908589 | MK908640 | MK908688 | MK908732 |
| Â | Â | ML320 | crown | 2012/06/27 | Taian Township, Miaoli County | MK908436 | MK908488 | MK908539 | MK908590 | MK908641 | MK908689 | MK908733 |
| Â | Â | ML328 | crown | 2012/07/02 | Shitan Township, Miaoli County | MK908437 | MK908489 | MK908540 | MK908591 | MK908642 | MK908690 | MK908734 |
| Â | Â | ML372 | crown | 2012/07/26 | Shitan Township, Miaoli County | MK908438 | MK908490 | MK908541 | MK908592 | MK908643 | MK908691 | MK908735 |
| Â | Â | ML393 | stolon | 2012/07/26 | Shitan Township, Miaoli County | MK908439 | MK908491 | MK908542 | MK908593 | MK908644 | MK908692 | MK908736 |
| Â | Â | ML416 | crown | 2012/08/15 | Dahu Township, Miaoli County | MK908440 | MK908492 | MK908543 | MK908594 | MK908645 | MK908693 | MK908737 |
| Â | Â | ML418 | crown | 2012/08/15 | Dahu Township, Miaoli County | MK908441 | MK908493 | MK908544 | MK908595 | MK908646 | MK908694 | MK908738 |
| Â | Â | ML419 | root | 2012/08/06 | Shitan Township, Miaoli County | MK908442 | MK908494 | MK908545 | MK908596 | MK908647 | MK908695 | MK908739 |
| Â | Â | ML443 | crown | 2012/07/26 | Shitan Township, Miaoli County | MK908443 | MK908495 | MK908546 | MK908597 | MK908648 | MK908696 | MK908740 |
| Â | Â | ML458 | crown | 2012/08/15 | Dahu Township, Miaoli County | MK908444 | MK908496 | MK908547 | MK908598 | MK908649 | MK908697 | MK908741 |
| Â | Â | ML461 | leaf | 2012/09/12 | Gongguan Township, Miaoli County | MK908445 | MK908497 | MK908548 | MK908599 | MK908650 | MK908698 | MK908742 |
| Â | Â | ML462 | crown | 2012/09/12 | Gongguan Township, Miaoli County | MK908446 | MK908498 | MK908549 | MK908600 | MK908651 | MK908699 | MK908743 |
| Â | Â | ML463 | root | 2012/09/12 | Gongguan Township, Miaoli County | MK908447 | MK908499 | MK908550 | MK908601 | MK908652 | MK908700 | MK908744 |
| Â | Â | ML464 | crown | 2012/09/13 | Shitan Township, Miaoli County | MK908448 | MK908500 | MK908551 | MK908602 | MK908653 | MK908701 | MK908745 |
| Â | Â | ML469 | crown | 2012/09/18 | Dahu Township, Miaoli County | MK908449 | MK908501 | MK908552 | MK908603 | MK908654 | MK908702 | MK908746 |
| Â | Â | ML471 | crown | 2012/09/18 | Dahu Township, Miaoli County | MK908450 | MK908502 | MK908553 | MK908604 | MK908655 | MK908703 | MK908747 |
| Â | Â | ML476 | root | 2012/09/18 | Dahu Township, Miaoli County | MK908451 | MK908503 | MK908554 | MK908605 | MK908656 | MK908704 | MK908748 |
| Â | Â | ML477 | crown | 2012/09/18 | Dahu Township, Miaoli County | MK908452 | MK908504 | MK908555 | MK908606 | MK908657 | MK908705 | MK908749 |
| Â | Â | ML485 | crown | 2012/10/04 | Guoxing Township, Nantou County | MK908453 | MK908505 | MK908556 | MK908607 | MK908658 | MK908706 | MK908750 |
| Â | Â | ML490 | crown | 2012/11/13 | Gongguan Township, Miaoli County | MK908454 | MK908506 | MK908557 | MK908608 | MK908659 | MK908707 | MK908751 |
| Â | Â | ML491 | crown | 2012/11/13 | Gongguan Township, Miaoli County | MK908455 | MK908507 | MK908558 | MK908609 | MK908660 | MK908708 | MK908752 |
| Â | Â | ML494 | crown | 2012/12/10 | Dahu Township, Miaoli County | MK908456 | MK908508 | MK908559 | MK908610 | MK908661 | MK908709 | MK908753 |
| Â | Â | ML513 | crown | 2013/01/11 | Shitan Township, Miaoli County | MK908457 | MK908509 | MK908560 | MK908611 | MK908662 | MK908710 | MK908754 |
| Â | Â | ML540 | stolon | 2013/04/22 | Gongguan Township, Miaoli County | MK908458 | MK908510 | MK908561 | MK908612 | MK908663 | MK908711 | MK908755 |
| Â | Â | ML608 | stolon | 2013/07/10 | Shitan Township, Miaoli County | MK908459 | MK908511 | MK908562 | MK908613 | MK908664 | MK908712 | MK908756 |
| Â | Â | ML612 | leaf | 2013/07/10 | Shitan Township, Miaoli County | MK908460 | MK908512 | MK908563 | MK908614 | MK908665 | MK908713 | MK908757 |
| Â | Â | ML617 | crown | 2013/07/18 | Dahu Township, Miaoli County | MK908465 | MK908517 | MK908568 | MK908619 | MK908670 | MK908718 | MK908762 |
| Â | Â | ML754 | leaf | 2016/03/17 | Chiayi County | MK908466 | MK908518 | MK908569 | MK908620 | MK908671 | MK908719 | MK908763 |
| Â | Â | ML762 | fruit | 2016/03/28 | Dahu Township, Miaoli County | MK908467 | MK908519 | MK908570 | MK908621 | MK908672 | MK908720 | MK908764 |
