Figure 6

Selective sweeping signatures of AGMO and ISPD in gamecock chickens. (A) ZFst analysis of AGMO and ISPD between Gamecocks population and the other chickens except for RJF, with a window size of 5Â Kb and a step size of 2Â Kb employed. (B) Haplotype diversity of AGMO across 157 chickens, along with the structure of the block containing a non-synonymous SNP site Chr2:27,980,304 corresponding to Ala312Thr (ENSGALT00000037945.3) presented in (D). (C) Haplotype diversity of ISPD across 157 chickens, with the structure of the block containing a non-synonymous SNP site Chr2:28,437,098 corresponding to Arg84Lys (ENSGALT00000017557.5) given in (E). In both (B) and (C), the major and minor alleles of each site are separately colored with the red and the blue, while the white denotes the missing allele.