Figure 4
From: Northstar enables automatic classification of known and novel cell types from tumor samples
Annotation of new pancreatic tumor samples. (A) t-SNE of 11 pancreatic tumors together with averages from two atlases by Baron et al. (2016) and Zanini et al. (2018)24,25. Stars: atlas averages. (B) Number of cells from each tumor and fractions of cells belonging to each cell type. (C) Top differentially expressed genes for each novel cluster (top) and some known markers (bottom) for pancreatic cancers38. Black indicates no expression, red to white increasing expression levels. PTPRC (CD45) and IGKC are added to highlight the probable B cell phenotype of cluster 19. First bar: novel cluster [colored as in (A) and (B)]. Second bar: patient of origin, with legend below.
