Table 1 Sequencing results showing the BLAST (Megablast option, except where indicated) homology of sandfly and filarial parasite sequences obtained from Xapuri—Rio Branco in relation to sequences found in GenBank.
Molecular marker | Query sequence | Match | Identity | GenBank accession |
|---|---|---|---|---|
COI | Sandfly (658 bp) MG029462–MG029463 | Psychodopygus (syn. Lutzomyia) hirsutus | 595/658 (90%) | KP112991.1 |
Psychodopygus (syn. Lutzomyia) thula | 592/657 (90%) | KC921238.1 | ||
Psathyromyia (syn. Lutzomyia) pascalei | 589/658 (90%) | KP112959.1 | ||
Parasite (649 bp) MG029460–MG029461 | Onchocerca gibsoni | 587/648 (91%) | AJ271616.1 | |
Onchocerca volvulus | 587/649 (90%) | KC167355.1 | ||
Onchocerca ochengi | 586/649 (90%) | KX181290.2 | ||
12S | Parasite (465 bp) MH049488 | Onchocerca takaokai | 439/471/ (93%) | AB972364.1 |
Onchocerca flexuosa | 429/465 (92%) | AP017692.1 | ||
Onchocerca sp type A | 431/470 (92%) | AB518879.1 | ||
Onchocerca cervipedis | 422/461 (92%) | JX075208.1 | ||
ITS | Parasite (376 bp) MH049489 | Onchocerca fasciata | 156/174 (90%) | JQ316671.1 |
Onchocerca volvulus | 145/161 (90%) | EU272179.1 | ||
Onchocerca sp. 1 WS-2017 | 292/373 (78%) BLASTn | MG192126.1 | ||
Onchocerca dewittei japonica | 284/360 (79%) BLASTn | MG192134.1 |
