Table 1 Prediction of pCR of HER2-positve breast cancers using HSD17B4 methylation, ER status, and their combination in age groups.

From: Multi-omics analyses identify HSD17B4 methylation-silencing as a predictive and response marker of HER2-positive breast cancer to HER2-directed therapy

Age

Total

HSD17B4 methylation

ER

Combination marker

High

(Positive rate)

Low

Negative

(Negative rate)

Positive

Positive

(Positive rate)

Negative

All

pCR

43

30

(69.8%)

13

35

(81.4%)

8

24

(55.8%)

19

(pCR rate)

(33.6%)

(75.0%)

 

(14.8%)

(53.8%)

 

(12.7%)

(80.0%)

 

(19.4%)

Non-pCR

85

10

(11.8%)

75

30

(35.3%)

55

6

(7.1%)

79

Total

128

40

(31.3%)

88

65

(50.8%)

63

30

(23.4%)

98

> 55

pCR

28

22

(78.6%)

6

23

(82.1%)

5

18

(64.3%)

10

(pCR rate)

(37.8%)

(73.3%)

 

(13.6%)

(54.8%)

 

(15.6%)

(78.3%)

 

(19.6%)

Non-pCR

46

8

(17.4%)

38

19

(41.3%)

27

5

(10.9%)

41

Total

74

30

(40.5%)

44

42

(56.8%)

32

23

(31.1%)

51

45–55

pCR

9

5

(55.6%)

4

6

(66.7%)

3

3

(33.3%)

6

(pCR rate)

(33.3%)

(83.3%)

 

(19.0%)

(46.2%)

 

(21.4%)

(75.0%)

 

(26.1%)

Non-pCR

18

1

(5.6%)

17

7

(38.9%)

11

1

(5.6%)

17

Total

27

6

(22.2%)

21

13

(48.1%)

14

4

(14.8%)

23

<45

pCR

6

3

(50.0%)

3

6

(100.0%)

0

3

(50.0%)

3

(pCR rate)

(22.2%)

(75.0%)

 

(13.0%)

(60.0%)

 

(0.0%)

(100.0%)

 

(12.5%)

Non-pCR

21

1

(4.8%)

20

4

(19.0%)

17

0

(0.0%)

21

Total

27

4

(14.8%)

23

10

(37.0%)

17

3

(11.1%)

24