Table 1 Amino acid variant fitness estimates in plant hosts and thrips.
Protein | AAV | Emilia | Datura | Plant | Thrips |
|---|---|---|---|---|---|
NSs | I79M | 0.004 | 0.104 | 0.044 | − 0.084 |
NSs | P181T | − 0.004 | 0.009 | 0.002 | − 0.186 |
NSm | V17G | − 0.014 | − 0.028 | − 0.018 | − 0.036 |
NSm | N22S | 0.036 | 0.091 | 0.053 | 0.063 |
Gc | E362D | − 0.228 | NA | − 0.228 | NA |
Gn | V141F | 0.0 | 0.0 | 0.0 | 0.0 |
RdRp | I226S | 0.048 | 0.0 | 0.0 | 0.0 |
RdRp | R290S | 0.025 | 0.094 | 0.061 | − 0.159 |
RdRp | N389S | 0.084 | 0.097 | 0.095 | − 0.421 |
RdRp | R495Q | 0.075 | 0.091 | 0.091 | − 0.402 |
RdRp | K566R | 0.0 | 0.006 | 0.0 | − 0.178 |
RdRp | N813D | 0.0 | NA | 0.0 | 0.0 |
RdRp | K863R | 0.0451 | 0.078 | 0.078 | − 0.367 |
RdRp | I1373M | NA | NA | NA | NA |
RdRp | I1602V | 0.0 | 0.0 | 0.0 | 0.0 |
RdRp | A1799T | 0.048 | 0.159 | 0.057 | − 0.171 |
RdRp | C2148Y | − 0.069 | 0.144 | 0.086 | NA |
