Figure 3
From: Impact of RNA-seq data analysis algorithms on gene expression estimation and downstream prediction
Analysis of variance decomposes the overall variance in (a) median accuracy of all genes, (b) median precision of all genes, and (c) median reliability of all genes into various factors considered, including five RNA-seq pipeline components (i.e., mapping algorithm, mapping strategy, mapping reporting, quantification, and normalization) and nine associated two-way interactions. The statistical significance of each component’s or interaction’s contribution is denoted by red asterisks, with ‘***’ indicating p-values are smaller than 0.001, ‘**’ indicating p-values are smaller than 0.01, and ‘*’ indicating p-values are smaller than 0.05.
