Table 1 U2AF1 mutation: protein sequence and clinical characteristics.

From: Differential U2AF1 mutation sites, burden and co-mutation genes can predict prognosis in patients with myelodysplastic syndrome

Total

U2AF1mutation protein sequence [case (%)]

Total X2/Z

Total p value

S24F

S34Y

Q157P

32

9

6

Median VAF

0.4127(0.0613~0.4902)

0.397(0.0138~0.4808)

0.37215(0.0401~0.4196)

 

0.535

Age (year)

55(21~77)

53(33~69)

67.5(43~83)

 

0.088

Gender (male)

23(71.9)

8(88.9)

2(33.3)

4.854

0.091

MDS subtype 1

1.154

0.655

MDS-SLD and -MLD

12(37.5)

5(55.6)

2(33.3)

  

MDS-EB1 + EB2

20(62.5)

4(44.4)

4(66.7)

  

MDS subtype 2

9.350

0.097

MDS-SLD

3(9.4)

1(11.1)

2(33.3)

  

MDS-MLD

9(28.1)

4(44.4)

0(0)

  

MDS-EB1

7(21.9)

0(0)

3(50)

  

MDS-EB2

13(40.6)

4(44.4)

1(16.7)

  

IPSS-R group

   

1.291

0.633

Relatively low risk group

7(21.9)

2(22.2)

0(0)

  

Relatively high risk group

25(78.1)

7(77.8)

6(100)

  

Laboratory Results

  

BM blast at diagnosis (%)

6.2(0.4~18.4)

4.8(0.4~14)

1.25(1~2.5)

 

0.752

 N (109/L)

0.77(0.06~8.63)

0.6(0.03~8.1)

1.16(0.32~6.5)

 

0.603

 PLT (109/L)

52(7~459)

38(29~394)

50(14~118)

 

0.86

 HGB (g/L)

73.5(28~131)

102(45~145)

61.5(49~87)

 

0.245

Chromosomal abnormality

13(40.6)

6(66.7)

4(66.7)

2.706

0.323

Chromosome 7 abnormality

2(6.3)

0(0)

4(66.7)

11.659

0.002

Chromosome 8 abnormality

6(18.8)

4(44.4)

0(0)

3.922

0.102

Chromosome 20 abnormality

5(15.6)

2(22.2)

0(0)

1.172

0.574

Complex karyotype (≥ 3)

1(3.1)

0(0)

1(16.7)

2.577

0.275

DEC treatment response

0.913

0.738

 Non-ORR

13(65)

3(60)

5(83.3)

  

 ORR

7(35)

2(40)

1(16.7)

  

 Total

  

 Relapse

4(12.5)

0(0)

0(0)

1.028

0.750

Transformed to AL

4(12.5)

1(11.1)

0(0)

0.538

1.000

Median OS (day)

     

Co-mutation gene

 

TET2 mutation

8(25)

3(33.3)

4(66.7)

3.849

0.134

ASXL1 mutation

13(40.6)

3(33.3)

1(16.7)

1.153

0.660

RUNX1 mutation

8(25)

1(11.1)

1(16.7)

0.713

0.860

TP53 mutation

1(3.1)

0(0)

1(16.7)

2.577

0.275

Epigenetic gene (+)

18(56.3)

4(44.4)

4(66.7)

0.806

0.744

Signal pathway gene (+)

6(18.8)

1(11.1)

4(66.7)

6.074

0.040

Other pathway gene (+)

10(31.3)

2(22.2)

3(50)

1.34

0.450

Number of co-mutation genes

   

8.396

0.160

 0

9(28.1)

3(33.3)

0(0)

  

 1

11(34.4)

2(22.2)

1(16.7)

  

 2

2(6.3)

2(22.2)

3(50)

  

 3

10(31.3)

2(22.2)

2(33.3)