Scientific Reports

Table 1 Interaction between YesO and ΔGalUA-Rha-Gal.

From: Bacterial inducible expression of plant cell wall-binding protein YesO through conflict between Glycine max and saprophytic Bacillus subtilis

Hydrogen bond (< 3.3 Å)					van der Waals interaction (< 4.5 Å)
Source		Target		Distance (Å)	Source		Target		Distance (Å)
Sugar	Atom	Protein/water	Atom	Distance (Å)	Sugar	Atom	Protein	Atom	Distance (Å)
ΔGalUA	O2	Asp75	OD1	2.5	ΔGalUA	C1	Trp20	CE2	4.3
	O2	Lys284	NZ	2.8			Trp20	CZ2	3.9
	O3	Ser286	O	2.6			Trp52	CE3	3.9
	O3	Asn127	ND2	2.9			Trp52	CZ3	3.6
	O5	Trp20	NE1	3.1			Trp52	CH2	4.1
	O6A	Arg25	NH2	2.8		C2	Trp20	CZ2	4.2
	O6A	Asn254	ND2	2.9			Trp52	CZ3	4.4
	O6B	Trp20	NE1	2.9			Asp75	CG	4.2
		Arg25	NH1	3.0		C3	Tyr252	CG	4.2
		water631-Gln255	NE2	2.7, 3.2			Tyr252	CD2	3.5
							Tyr252	CE2	3.7
							Lys284	CE	4.2
						C4	Met287	CE	4.3
							Gln255	CD	4.4
							Tyr252	CD2	4.0
						C5	Trp20	CZ2	4.3
							Met287	CE	4.1
							Gln255	CD	4.3
						C6	Arg25	CZ	4.0
							Met287	CE	3.8
							Gln255	CD	4.1
							Gln255	CG	4.1
Rha	O1	water634-Asp178	OD1	2,7, 2.8	Rha	C1	Trp52	CE2	4.4
Rha	O4	Gln255	NE2	3.1			Trp52	CZ2	4.2
							Ile179	CG1	4.1
						C2	Trp52	CD2	4.0
							Trp52	CE2	4.1
							Trp52	CE3	4.0
							Trp52	CZ2	4.2
							Trp52	CZ3	4.0
							Trp52	CH2	4.1
						C4	Gln255	CD	3.9
						C5	Pro176	CD	3.9
						C5	Tyr252	CE2	4.2
						C6	Pro176	CD	4.2
							Tyr252	CD2	4.0
							Tyr252	CE2	3.9
							Phe180	CE2	3.9
							Phe180	CZ	4.0
Gal	O2	His175	O	2.8	Gal	C3	His175	CD2	4.1
	O3	water659-Asn172	ND2	2.9, 3.0		C4	Asp239	CG	4.1
	O3	water659-Asp239	OD1	2.9, 2.7		C6	Met236	CE	3.9
	O4	Asp239	OD2	2.7			Phe259	CE1	4.0
	O4	Asn251	ND2	3.1			Phe259	CZ	3.8
	O5	Asn251	ND2	3.1
	O5	Gln255	NE2	3.1
	O6	Asp239	OD2	2.7

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