Table 1 Gene copies of CDKs in the Symbiodiniaceae.
From: Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
Source of database | CDK1/2/3 subfamily | CDK4/6 subfamily | CDK5 subfamily (CDK5/14/15/Pho85) | CDK7 | CDK8 subfamily (CDK8/19) | CDK9 subfamily (CDK9/12/13) | CDK10/CDK11 subfamily | CDK20 | Alveolate-specific CDKA | Alveolate-specific CDKB | Alveolate-specific CDKC | Alveolate-specific CDKD | Alveolate-specific CDKE | Alveolate-specific CDKF | Alveolate-specific CDKG | Alveolate-specific CDKH | Alveolate-specific CDKI | Alveolate-specific CDKJ | Parasitic CDKA | Apicomplexan Cdc2-like CDK | Total | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S. microadriaticum | G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 11 | |||||||||
S. tridacnidorum | G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 12 | ||||||||
Symbiodinium sp. #1 | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 10 | ||||||||||
Symbiodinium sp. #2 | T | 1 | 1 | 1 | 1 | 1 | 5 | |||||||||||||||
B. minutum | G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 14 | ||||||
B. aenigmaticum | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 11 | |||||||||
B. pseudominutum | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 13 | ||||||||
B. psygmophilum | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 13 | |||||||
Breviolum sp. #1 | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 13 | ||||||||
C. goreaui | G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 16 | |||||
Cladocopium sp. C15 | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 9 | |||||||||||
Cladocopium sp. C92 | G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 10 | ||||||||||
Cladocopium sp. #1 | T | 1 | 1 | 1 | 3 | |||||||||||||||||
Cladocopium sp. #2 | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 10 | ||||||||||
Cladocopium sp. #3 | T | 1 | 1 | 1 | 2 | |||||||||||||||||
D. trenchii | T | 1 | 1 | 1 | 1 | 1 | 1 | 6 | ||||||||||||||
Durusdinium sp. #1 | T | 1 | 1 | 1 | 1 | 1 | 4 | |||||||||||||||
Effrenium voratum | T | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 7 | |||||||||||||
Fugacium kawagutii | G | 1 | 1 | 1 | 1 | 1 | 1 | 5 | ||||||||||||||
TOTAL | 1 | 0 | 2 | 13 | 0 | 10 | 11 | 4 | 9 | 18 | 17 | 14 | 17 | 13 | 7 | 9 | 14 | 15 | 2 | 1 | 177 |
