Table 3 List of primers and probes used for the multiplex dPCR assay.

From: Development and validation of a 4-color multiplexing spinal muscular atrophy (SMA) genotyping assay on a novel integrated digital PCR instrument

Name

Description

Oligonucleotide Sequence (5′ > 3′)

SMN1f

Forward primer

5′-AATGCTTTTTAACATCCATATAAAGCT-3′

SMN1r

Reverse primer

5′-CCTTAATTTAAGGAATGTGAGCACC-3′

SMN1p

Probe

5′-FAM-TCCTTACAGGGTTTCAGACAAAATCAA-QSY-3′

SMN2f

Forward Primer

5′-AATGCTTTTTAACATCCATATAAAGCT-3′

SMN2r

Reverse Primer

5′-CCTTAATTTAAGGAATGTGAGCACC-3′

SMN2p

Probe

5′-VIC-TCCTTACAGGGTTTTAGACAAAATCAA-QSY-3′

totalSMNf

Forward primer

5′-GGAAGTTTCAGGAAGTGGTAGG-3′

totalSMNr

Reverse primer

5′-CCACCAGGACTGCCTTTATATC-3′

totalSMNp

Probe

5′- TYE675-AGAAGATGGCAGGGTGTTGGGAAT-IAbRQSp-3′

RPPH1f

Forward primer

5′-CTTTGCCGGAGCTTGGA-3′

RPPH1r

Reverse primer

5′-GAGAGTAGTCTGAATTGGGTTATGA-3′

RPPH1p

Probe

5′-6-TAMRA-ACCTCACCTCAGCCATTGAACTCAC-IAbRQSp-3′