Figure 2 | Scientific Reports

Figure 2

From: Characterisation of CD4+ T-cell subtypes using single cell RNA sequencing and the impact of cell number and sequencing depth

Figure 2

Sequencing metrics. Panels a-d show the effect of read depth on (a) sequencing saturation, (b) total genes detected, (c) median genes per cell and (d) median unique molecular identifier (UMI) counts per cell. Panels e and f show cell numbers pre and post quality control for (e) unstimulated and (f) stimulated samples. Unstimulated datasets are shown in blue and stimulated datasets in red.

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