Table 1 Model population definitions and initial values denoted with subscript 0 for each state variable.

From: Variation in microparasite free-living survival and indirect transmission can modulate the intensity of emerging outbreaks

Symbols

Initial values

Units

Definitions

Sources

S0

Varies by country

People

Susceptible individuals

Vary

E0

\({\mathcal{R}}_{0}\) · (IA0 + IS0)

People

Exposed individuals

Deduced

IA0

IS0

People

Asymptomatic individuals

Deduced

IS0

Varies

People

Symptomatic individuals

Deduced

Rec0

0

People

Recovered individuals

Deduced

W0

1%

Unitless

% of viruses in environment

Deduced

  1. Here we present definitions for the population groups represented by each compartment as well as their initial values. The initial value of the S and IS populations vary by country, as shown in Table 2. We take the initial value of the IA population to be the same as the initial value of symptomatic individuals as a conservative estimate. The initial value of the E population is computed by assuming that all initially-infected people (IA0 + IS0) have exposed the virus to approximately other people.
  2. \({\mathcal{R}}_{0}\) (≈ 2.5).