Figure 8
From: Genetic origins and diversity of bushpigs from Madagascar (Potamochoerus larvatus, family Suidae)
Amino-acid sequence and selection of SLA-DQB1 exon-2 haplotypes. Analysis was completed using DataMonkey HyPhy server83. Dots represent identical residues to DQB1-1 at the positions shown. Grey shaded sites indicate the antigen-binding sites and yellow indicate the conserved cysteines. Positions significant for positive (+) or negative (−) selection for at least two methods (MEME/FEL/SLAC/REL) are indicated for each population/location category. Dotted lines indicate haplotypes found in bushpigs and haplotypes in bold font are found in mainland bushpigs.
