Table 1 Lengths and GC contents of mitogenomes included in the phylogeny.
From: The earliest diverging extant scleractinian corals recovered by mitochondrial genomes
Species | Accession | Length (bp) | GC content (%) |
|---|---|---|---|
Actiniaria | |||
Metridium senile | AF000023 | 17,443 | 38.1 |
Nematostella sp. | DQ643835 | 16,389 | 39.1 |
Corallimorpharia | |||
Corallimorphus profundus | KP938440 | 20,488 | 39.7 |
Discosoma nummiforme | KP938434 | 20,925 | 39.0 |
Pseudocorynactis sp. | KP938437 | 21,239 | 39.1 |
Micrabaciidaea | |||
Letepsammia formosissimab | MT705247 | 19,048 | 37.9 |
Letepsammia frankib | MT706036–MT706040 | 18,206 | 37.8 |
Letepsammia superstes | MT706035 | 19,073 | 37.9 |
Rhombopsammia niphada | MT706034 | 19,542 | 37.8 |
Gardineriidae | |||
Gardineria hawaiiensis | MT376619 | 19,429 | 39.7 |
“Complex” | |||
Acropora tenuis | AF338425 | 18,338 | 38.0 |
Agaricia humilis | DQ643831 | 18,735 | 40.4 |
Alveopora sp. | KJ634271 | 18,146 | 37.9 |
Anacropora matthai | AY903295 | 17,888 | 38.4 |
Dendrophyllia arbuscula | KR824937 | 19,069 | 37.3 |
Fimbriaphyllia ancora | JF825139 | 18,875 | 37.8 |
Fungiacyathus stephanus | JF825138 | 19,381 | 37.8 |
Galaxea fascicularis | KU159433 | 18,751 | 38.3 |
Goniopora columna | JF825141 | 18,766 | 37.1 |
Pavona clavus | DQ643836 | 18,315 | 40.5 |
Porites lobata | KU572435 | 18,647 | 36.2 |
Porites porites | DQ643837 | 18,648 | 36.3 |
Pseudosiderastrea tayamai | KP260633 | 19,475 | 36.3 |
Tubastraea coccinea | KX024566 | 19,094 | 37.2 |
Turbinaria peltata | KJ725201 | 18,966 | 37.0 |
“Robust” | |||
Astrangia sp. | DQ643832 | 14,853 | 31.9 |
Colpophyllia natans | DQ643833 | 16,906 | 33.6 |
Cyphastrea serailia | KY094484 | 17,138 | 33.5 |
Desmophyllum dianthus | KX000893 | 16,310 | 35.1 |
Desmophyllum pertusum | KC875348 | 16,149 | 34.9 |
Dipsastraea rotumana | KY094481 | 16,466 | 33.2 |
Echinophyllia aspera | MG792550 | 17,697 | 34.1 |
Favites abdita | KY094479 | 17,825 | 33.8 |
Hydnophora exesa | KY094486 | 17,790 | 33.4 |
Madracis decactisb | KX982259 | 16,970 | 31.7 |
Madracis mirabilis | EU400212 | 16,951 | 31.7 |
Madrepora oculata | JX236041 | 15,841 | 30.3 |
Mussa angulosa | DQ643834 | 17,245 | 33.7 |
Orbicella annularisb | AP008974 | 16,138 | 33.6 |
Platygyra carnosa | JX911333 | 16,463 | 33.0 |
Plesiastrea versipora | MH025639 | 15,320 | 32.0 |
Pocillopora damicornis | EU400213 | 17,425 | 30.2 |
Pocillopora eydouxi | EF526303 | 17,422 | 30.1 |
Polycyathus sp. | JF825140 | 15,357 | 29.1 |
Sclerophyllia maxima | FO904931 | 18,168 | 33.7 |
Solenosmilia variabilis | KM609293 | 15,968 | 34.7 |