Table 2 QTLs detected for various physiological and yield component traits in the HD2733/2*C306 backcross inbred lines population.

From: Mapping genomic regions of moisture deficit stress tolerance using backcross inbred lines in wheat (Triticum aestivum L.)

Trait

Location

QTL

Position

Marker interval

LOD

PVE (%)

Additive effect

Confidence interval (cM)

CL

E1

QCl.iari_4B

96

AX-94496390-AX-94957045

11.24

28.35

− 0.83

94.5–98.5

E1

QCl. iari_5D

314

AX-94666462-AX-95248961

3.32

12.63

− 0.74

304.5–323.5

NDVI-1

E2

QNdvi1.iari_5D

282

Xwmc318-AX-94666462

3.65

7.40

0.074

274.5–288.5

NDVI-2

E1

QNdvi2.iari_2A

334

AX-94497666-AX-94569814

4.06

11.20

0.025

328.5–336.5

E6

QNdvi2.iari_6D

182

AX-95006509-Xbarc54.1

2.98

9.11

0.027

172.5–191.5

E3

QNdvi2.iari_5D

283

Xwmc318-AX-94666462

3.03

5.71

0.019

277.5–291.5

E4

QNdvi2.iari_5A

240

AX-95001743-AX-95152679

3.69

8.13

− 0.02

238.5–244.5

E4

QNdvi2.iari_6B

77

AX-94523287-AX-94610216

4.47

9.71

− 0.04

73.5–87.5

NDVI-3

E2

QNdvi3.iari_5A

221

AX-94414339-AX-94730618

2.67

4.58

− 0.016

218.5–222.5

E2

QNdvi3.iari_5D

71

Xgdm63-Xcfd29

3.14

8.62

− 0.023

62.5–77.5

E7

QNdvi3.iari_2D

44

AX-94429402-AX-95164994

2.61

5.12

− 0.028

40.5–48.5

E7

QNdvi3.iari_6A

17

AX-94407050-Xwmc417

3.62

9.46

− 0.032

15.5–24.5

E2

QNdvi3.iari_2A

280

AX-95211689-AX-95193898

2.71

8.06

0.010

278.5–286.5

NDVI-4

E1

QNdvi4.iari_5A

221

AX-94414339-AX-94730618

3.30

8.08

− 0.028

218.5–222.5

NDVI-5

E1

QNdvi5.iari_6D

97

Xbarc183-AX-95010178

3.78

9.30

− 0.039

85.5–98.5

E5

QNdvi5.iari_6A

101

AX-95247279-AX-94870783

3.51

8.55

0.037

96.5–108.5

NDVI-6

E1

QNdvi6.iari_7A

144

AX-94976788-AX-94756419

2.70

6.26

− 0.036

142.5–145.5

E6

QNdvi6.iari_2A

170

Xgdm93-AX-94389568

2.87

6.26

− 0.05

167.5–172.5

E6

QNdvi6.iari_7B

132

Xwmc517-Xwmc501

8.64

7.21

− 0.07

125.5–138.5

Chl. content

E1

QChl.iari_5A

221

AX-94414339-AX-94730618

4.81

9.30

1.09

218.5–221.5

E1

QChl.iari_5B

33

AX-95091073-AX-94525037

4.25

8.27

1.11

31.5–36.5

E1

QChl.iari_2A

61

AX-94465394- AX-94876482

3.57

6.75

− 0.84

58.5–63.5

E5

QChl.iari_6D

183

AX-95006509-Xbarc54.1

2.67

2.10

4.86

175.5–189.5

E2

QChl.iari_4A

207

AX-94592862- AX-94460475

3.12

7.59

2.42

197.5–212.5

E6

QChl.iari_5A

230

AX-94531685-AX-94726381

3.52

8.34

0.68

228.5–230.5

E6

QChl.iari_3B

207

Xwmc689-Xwmc78

3.44

8.61

− 1.04

195.5–217.5

E3

QChl.iari_5D

313

AX-94666462-AX-95248961

2.62

8.10

3.85

304.5–326

CT-1

E2

QCt1.iari_2A

324

AX-94456186-Xgwm275

2.91

7.45

− 0.56

322.5–324.5

E2

QCt1.iari_7D

31

Xwmc606.1-AX-95154446

3.38

9.26

0.57

23.5–34.5

CT-3

E3

QCt3.iari_2A

335

AX-94497666-AX-94569814

2.62

7.37

0.041

328.5–340.5

CT-4

E1

QCt4.iari_5A

106

Xgwm304-AX-94920631

4.07

9.09

0.59

90.5–115.5

RWC

E1

QRwc.iari_5D

321

AX-94666462-AX-95248961

2.51

5.40

2.02

306.5–326

E1

QRwc.iari_7A

143

AX-94976788-AX-94756419

5.11

10.77

− 2.98

142.5–144.5

FLA

E1

QFla.iari_2D

23

AX-95151743-AX-94877462

3.72

11.44

− 2.91

15.5–35.5

E1

QFla.iari_6B

240

XXwmc397-Xwmc494

3.06

3.69

1.69

232.5–245.5

AL

E1

QAl.iari_4A

31

Xbarc78-AX-94694992

2.99

4.30

− 0.16

21.5–39.5

PH

E1

QPh.iari_4B-3

107

AX-95630675-AX-94592612

4.38

9.31

− 2.64

99.5–111.5

E2

QPh.iari_4B-2

95

AX-94496390-AX-94957045

8.36

13.92

− 4.62

94.5–97.5

E5

QPh.iari_4B-3

104

AX-95630675-AX-94592612

5.57

13.67

− 3.746

99.5–110.5

E3

QPh.iari_7B

266

AX-94622790-AX-95072534

3.68

7.34

4.44

262.5–268.5

E7

QPh.iari_4B-2

95

AX-94496390-AX-94957045

3.56

8.48

− 3.30

93.5–96.5

TGW

E1

QTgw.iari_7A

135

AX-95097028-AX-94417618

3.55

9.91

− 7.59

133.5–135.5

E2

QTgw.iari_2B

206

AX-95153769-Xbarc167

3.43

8.57

− 2.13

202.5–212.5

E5

QTgw.iari_2A

84

AX-94995080-AX-94482613

3.06

11.20

3.2416

80.5–92.5

E3

QTgw.iari_5D

87

Xcfd29-Xwmc215

2.64

7.11

2.05

70.5–94.5

GWPS

E5

QGwps.iari_5B

43

AX-94525037-AX-94755266

2.71

7.71

− 0.235

40.5–44.5

E6

QGwps.iari_1A

23

AX-94901922-AX-94793862

3.97

8.61

0.87

22.5–24.5

E6

QGwps.iari_5B

42

AX-94525037-AX-94755266

3.70

9.03

− 0.94

39.5–44.5

E6

QGwps.iari_7A

227

Xwmc488.2-Xwmc606.2

3.15

7.60

− 0.85

214.5–238.5

GY

E2

QYld.iari_2B

155

AX-94493467-AX-94703320

2.79

7.14

− 38.58

150.5–156.5

E5

QYld.iari_2A

43

AX-94698653-AX-94545499

3.62

7.67

− 21.71

40.5–46.5

E5

QYld.iari_6A

122

AX-95247279-AX-94870783

3.42

7.91

− 23.44

109.5–125.5

HI

E1

QHi.iari_2A

56

AX-94867650-AX-95009146

4.18

7.67

− 0.02

55.5–57.5

E1

QHi.iari_5A

229

AX-94531685-AX-94726381

4.28

8.31

0.02

224.5–230.5

E1

QHi.iari_2D

44

AX-94429402-AX-95164994

3.17

6.52

0.02

38.5–48.5

E3

QHi.iari_5D

86

Xcfd29-Xwmc215

2.79

6.00

0.02

78.5–100.5

E7

QHi.iari_5B

193

AX-94655148-AX-95141741

3.59

8.20

0.03

190.5–196.5

DH

E6

QDh.iari_6D

183

AX-95006509-Xbarc54.1

3.10

6.23

5.06

169.5–193.5

E1

QDh.iari_6D

196

AX-95006509-Xbarc54.1

2.76

6.99

4.73

162.5–203.5

BIOMASS

E2

QBiomass.iari_7B

126

Xwmc517-Xwmc501

2.85

10.32

181.84

110.5–136.5

  1. Confidence interval (cM), Position of QTL located on chromosome: as cM distance from the top of each map.
  2. LOD, A LOD threshold of 2.5 was used for declaration of QTL.
  3. PVE (%), Phenotypic variance explained by QTL.
  4. Additive effect, Positive “additive effect” indicates an increasing effect from HD2733; negative “additive effect” indicates an increasing effect from C306.
  5. Location code; E1-Delhi rainfed (2016–2017), E2-Delhi irrigated (2016–2017), E3-Indore restricted irrigation (2016–2017), E4-Powarkheda rainfed (2016–2017), E5-(Delhi rainfed (2017–2018), E6-Delhi irrigated (2017–2018) and E7-Indore restricted irrigation (2017–2018).
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