Table 2 Domain used by S. pneumoniae PspC and Hic proteins.

From: Molecular analyses identifies new domains and structural differences among Streptococcus pneumoniae immune evasion proteins PspC and Hic

#

Region

  

Domain

Sub domains

Class

n

Module

Structure

 

Comment host ligand

1

  

Known

SP

  

11

    

2

N-term

 

Known

HVD

HVD-A, HVD-B, HVD-C

 

11

 

α helix

PspC/Hic specific

Factor H

3

  

Known

RD

RD-I, RD-II, RD-III

 

7

 

α helix

 

sIGA/plgR

     

RD-II

PspC

5

 

α helix

  

4

  

Known

RCD

  

8

 

α helix

  

5

 

1

New

SnD/Gs2

3 Positions

 

10

 

Coiled coil

  

6

 

2

New

RCE1

 

PspC

2

 

α helix

 

Lactoferrin

7

 

3

New

RCE2

  

2

 

A helix

  

8

 

4

New

PspA related

 

PspC

2

 

α helix

In PspA

 

9

 

5

New

R-type

  

3

 

α helix

 

IgA

10

 

6

New

EPRD

  

4

 

α helix

  

11

 

7

New

IgA

  

4

 

α helix

S. agalactiae

 

12

 

8

New

VS4.2

 

PspC

1

 

α helix

Specific

 

13

 

9

New

VS11.1

 

Hic

1

 

α helix

Specific

 

14

C-term

 

Known

PRD

PRD-IA, PRD-1B

PspC

5

Modular

Coiled coil

Also in PspA

Cell wall spanning

   

New

 

PRD-II

PspC

1

Modular

Coiled coil

?

 
   

New

 

PRD-III

Hic

1

Modular

Coiled coil

?

 
   

New

 

PRD-IV

Hic

4

Modular

Coiled coil

?

 

15

  

Known

Anchor

CBD

PspC

6

Modular

β sheets

Several

Anchor

16

  

Known

 

LPsTG

Hic

5

 

Coiled coil

Many

Anchor

  1. The binding sites for Factor H has been mapped within the Hypervariable Domain of PspC3.1 and that of sIgA and the extracellular domain of pIgR to the RNYPT motif of Repeat Domains I and II. C3, C4BP, Plasminogen, Thrombospondin 1, vitronectin have been shown to bind intact S. pneumoniae and full length PspC and Hic proteins, but their binding sites have not been mapped to specific domains. Binding of Lactoferrin and IgA is proposed based on the homology between PspC and Hic variants and the S. pneumoniae immune escape protein PspA and the sIgA binding protein of S. agalactiae.