Table 2 Domain used by S. pneumoniae PspC and Hic proteins.
# | Region | Domain | Sub domains | Class | n | Module | Structure | Comment host ligand | |||
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Known | SP | 11 | ||||||||
2 | N-term | Known | HVD | HVD-A, HVD-B, HVD-C | 11 | α helix | PspC/Hic specific | Factor H | |||
3 | Known | RD | RD-I, RD-II, RD-III | 7 | α helix | sIGA/plgR | |||||
RD-II | PspC | 5 | α helix | ||||||||
4 | Known | RCD | 8 | α helix | |||||||
5 | 1 | New | SnD/Gs2 | 3 Positions | 10 | Coiled coil | |||||
6 | 2 | New | RCE1 | PspC | 2 | α helix | Lactoferrin | ||||
7 | 3 | New | RCE2 | 2 | A helix | ||||||
8 | 4 | New | PspA related | PspC | 2 | α helix | In PspA | ||||
9 | 5 | New | R-type | 3 | α helix | IgA | |||||
10 | 6 | New | EPRD | 4 | α helix | ||||||
11 | 7 | New | IgA | 4 | α helix | S. agalactiae | |||||
12 | 8 | New | VS4.2 | PspC | 1 | α helix | Specific | ||||
13 | 9 | New | VS11.1 | Hic | 1 | α helix | Specific | ||||
14 | C-term | Known | PRD | PRD-IA, PRD-1B | PspC | 5 | Modular | Coiled coil | Also in PspA | Cell wall spanning | |
New | PRD-II | PspC | 1 | Modular | Coiled coil | ? | |||||
New | PRD-III | Hic | 1 | Modular | Coiled coil | ? | |||||
New | PRD-IV | Hic | 4 | Modular | Coiled coil | ? | |||||
15 | Known | Anchor | CBD | PspC | 6 | Modular | β sheets | Several | Anchor | ||
16 | Known | LPsTG | Hic | 5 | Coiled coil | Many | Anchor |