Table 2 Top10 upregulated and down-regulated DELs (FPKM > 1) between tx-j and control mice.

From: Differentially expressed lncRNAs in liver tissues of TX mice with hepatolenticular degeneration

lncRNA_id

Locus

Length

tx-j

CN

log2FC

P value

Updown

NONMMUT060008.2

7:14,410,690–14,411,717

1028

0.172

172.514

− 9.973

2.52E−41

DOWN

NONMMUT060075.2

7:16,915,382–16,916,322

941

0.067

27.846

− 8.690

2.63E−38

DOWN

NONMMUT096375.1

15:89,767,563–89,768,777

817

0.057

6.597

− 6.844

1.33E−04

DOWN

NONMMUT152860.1

8:105,051,546–105,058,411

1236

0.037

3.502

− 6.546

5.83E−13

DOWN

NONMMUT008761.2

11:20,225,237–20,226,853

1617

0.206

17.552

− 6.414

1.12E−05

DOWN

NONMMUT001029.2

1:58,405,414–58,407,353

1940

0.123

9.000

− 6.196

6.17E−05

DOWN

NONMMUT050970.2

4:155,619,936–155,623,338

3403

0.132

9.308

− 6.143

3.01E−06

DOWN

NONMMUT027553.2

16:87,376,654–87,378,943

2290

0.066

3.928

− 5.903

6.59E−10

DOWN

MSTRG.41348.1

4:61,444,453–61,524,270

560

0.044

2.549

− 5.872

2.77E−11

DOWN

NONMMUT054921.2

5:137,336,283–137,338,185

1176

0.052

3.016

− 5.852

1.59E−19

DOWN

MSTRG.12342.1

12:23,832,607–23,841,289

428

23.898

0.046

9.031

8.40E−08

UP

MSTRG.64316.1

X:33,549,148–33,863,315

1414

3.692

0.007

9.060

2.41E−21

UP

MSTRG.36679.1

3:12,833,226–12,849,812

1630

3.330

0.006

9.117

1.60E−10

UP

NONMMUT089191.1

13:3,386,160–3,388,230

2071

5.325

0.009

9.139

3.52E−27

UP

MSTRG.64312.1

X:33,541,135–33,841,298

643

20.056

0.030

9.365

1.20E−25

UP

MSTRG.40589.1

4:40,651,444–40,660,004

297

22.185

0.032

9.448

2.50E−18

UP

MSTRG.47803.6

5:145,463,518–145,800,965

1195

12.340

0.016

9.584

1.03E−22

UP

NONMMUT050450.2

4:144,131,848–144,133,881

2034

59.925

0.053

10.152

3.13E−15

UP

NONMMUT089188.1

13:3,363,013–3,363,773

761

14.982

0.012

10.239

1.44E−29

UP

MSTRG.61463.4

9:58,702,406–58,712,258

1161

28.375

0.017

10.718

2.71E−31

UP

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