Table 6 CTL epitopes prediction results.
From: An in silico deep learning approach to multi-epitope vaccine design: a SARS-CoV-2 case study
Subunits | Peptide sequence | CTL epitopes | HLA class I alleles and supertypes | HLA score |
|---|---|---|---|---|
Subunit 1 | TTRTQLPPAYTNSFTRGVYYPDKVFRSSVL | 9 | A1, A2, A24, A26, B7, B8, B27, B39, B58, B62 | 4.652 |
Subunit 3 | SGTNGTKRFDNPVLPFNDGVYFASTEKSNI | 6 | A1, A3, A24, B7, B27, B39, B62 | 2.492 |
Subunit 4 | LGVYYHKNNKSWMESEFRVYSSANNCTFEY | 9 | A1, A3, A24, A26, B39, B40, B58, B62 | 6.124 |
Subunit 5 | FVFKNIDGYFKIYSKHTPINLVRDLPQGFS | 9 | A1, A2, A24, A26, B7, B8, B27, B39, B58, B62 | 7.131 |
Subunit 9 | IRGDEVRQIAPGQTGKIADYNYKLPDDFTG | 6 | A2, A3, B7, B27, B62 | 3.092 |
Subunit 10 | NNLDSKVGGNYNYLYRLFRKSNLKPFERDI | 9 | A1, A3, A24, B8, B27, B39, B62 | 4.326 |
Subunit 13 | ILDITPCSFGGVSVITPGTNTSNQVAVLYQ | 5 | A1, A3, A24, B8, B27, B39, B62 | 5.837 |
Subunit 15 | HVNNSYECDIPIGAGICASYQTQTNSPRRA | 3 | A1, B7, B40, B62 | 0.211 |
Subunit 18 | EQDKNTQEVFAQVKQIYKTPPIKDFGGFNF | 7 | A1, A2, A3, A24, A26, B8, B39, B40, B62 | 4.282 |
Subunit 19 | LPDPSKPSKRSFIEDLLFNKVTLADAGFIK | 8 | A1, A2, A3, A24, B7, B8, B27, B39, B40, B58, B62 | 5.763 |
Subunit 23 | LGQSKRVDFCGKGYHLMSFPQSAPHGVVFL | 8 | A1, A2, A3, A24, A26, B7, B8, B39, B58, B62 | 6.167 |
Subunit 24 | VFVSNGTHWFVTQRNFYEPQIITTDNTFVS | 8 | A2, A3, A24, A26, B27, B39, B58, B62 | 5.66 |
Subunit 25 | FKNHTSPDVDLGDISGINASVVNIQKEIDR | 4 | A2, A26, B39 | 1.341 |
Subunit 26 | IQKEIDRLNEVAKNLNESLIDLQELGKYEQ | 5 | A1, A2, B7, B8, B40, B62 | 3.26 |
