Figure 7

PCoA based on the beta-diversities between samples (Bray–Curtis metric), computed on genera abundances of caeca samples normalized by DESeq2, labelled by sampling time: 14th day (gold), 35th day (cyan). (a, b) with all genera detected respectively by shotgun (a) and 16S (b); with genera found exclusively by shotgun (c) or 16S (d).