Table 6 Top 10 most differentially expressed genes in the AD-VIC.

From: Defining early changes in Alzheimer’s disease from RNA sequencing of brain regions differentially affected by pathology

Rank

GENCODE #

Gene symbol

Gene name

Log FC

p value (FDR adjusted)

1

ENSG00000185710

Non-coding

SMG1 pseudogene 4

− 6.3

4.3E−18*

2

ENSG00000275954

TBC1D3F

TBC1 domain family member 3F

− 13.3

3.1E−15*

3

ENSG00000205632

Non-coding

LINC01310

− 2.0

2.6E−07

4

ENSG00000197728

RPS26

ribosomal protein S26

− 1.2

3.5E−07

5

ENSG00000226259

Non-coding

General transcription factor IIH subunit 2B (pseudogene)

3.5

3.5E−07a

6

ENSG00000275830

Non-coding

AL355974.2

2.1

7.8E−06

7

ENSG00000116031

CD207

CD207 molecule, langerin

− 5.8

1.4E−04

8

ENSG00000250770

Non-coding

AC005865.2

− 1.5

1.5E−04

9

ENSG00000254269

Non-coding

CTD-2281E23.2

− 1.9

1.5E−04

10

ENSG00000134201

GSTM5

Glutathione S-transferase mu 5

− 1.4

1.6 E−04

  1. aDEG in AD-PREC.