Table 1 Summary of pathogen variants, host SNPs and covariates for 268 individuals.
From: The influence of human genetic variation on Epstein–Barr virus sequence diversity
Dataset | Variable | Counts | Mean | Median | SD | Min | Max |
|---|---|---|---|---|---|---|---|
Pathogen genome (83 Rare EBV gene variation) | Variant frequency | 0.067 | 0.049 | 0.057 | 0 | 0.37 | |
Pathogen genome (575 EBV amino acids) | Variant frequency | 0.26 | 0.24 | 0.12 | 0.093 | 0.5 | |
Covariates | Sex | Male: 206, female: 62 | |||||
Covariates | AGE | 42.02 | 40.79 | 10.98 | 20.25 | 77.52 | |
Covariates | PC1 | − 8.95 | − 7.12 | 32.53 | − 69.95 | 76.11 | |
Covariates | PC2 | 7.39 | 8.4 | 30.41 | − 63.83 | 61.8 | |
Covariates | PC3 | 4.45 | 3.19 | 21.41 | − 46.44 | 51.11 | |
Covariates | PC4 | − 3.91 | − 6.69 | 20.72 | − 36.49 | 52.11 | |
Covariates | PC5 | − 5.09 | − 8.39 | 18.76 | − 51.7 | 56.02 | |
Covariates | PC6 | − 3.16 | − 3.21 | 18.65 | − 55.69 | 35.68 | |
Covariates | EBV type | 0.54 | 0.95 | 0.67 | − 1 | 1 |
