Table 1 Predictions accuracy of six ML models on the two datasets.
Stage | Model | First (96 SNPs) | Second (9 SNPs) | Average |
|---|---|---|---|---|
Dataset 1 | GBM | 0.617 | 0.752 | 0.684 |
SVM | 0.479 | 0.760 | 0.620 | |
RF | 0.646 | 0.777 | 0.711 | |
KNN | 0.640 | 0.727 | 0.683 | |
C5.0 | 0.604 | 0.721 | 0.663 | |
PLS | 0.617 | 0.752 | 0.684 | |
Dataset 2 | GBM | 0.705 | 0.774 | 0.740 |
SVM | 0.840 | 0.757 | 0.799 | |
RF | 0.819 | 0.799 | 0.809 | |
KNN | 0.778 | 0.743 | 0.760 | |
C5.0 | 0.816 | 0.781 | 0.799 | |
PLS | 0.705 | 0.774 | 0.740 |