Figure 1
Scatter plot representing expressed transcripts. A comparison of the transcriptome of Mr5 after inoculation with the wild type strain Ea1189 and the avrRpt2EA mutant strain ZYRKD3-1 was done using DESeq software package. The average of normalized read count values, dividing by size factors (base mean) is plotted against the log2 fold change at 2 hpi (left) and 48 hpi (right). Statistically significant differentially expressed genes (DEGs) are depicted as red dots (10% false discovery rate). Figure 1 was created with DESeq R package [vers. 3.0.2].
