Table 1 Counts of miRNAs identified DESEq2 and limma.

From: Dynamic miRNA changes during the process of epileptogenesis in an infantile and adult-onset model

Epilepsy onset

Epilepsy stage

Raw reads > 500

Normalised reads > 500

p-value < 0.05

FC > 1.4

reads > 500

p-value < 0.01

FC > 1.4

reads > 500

DESeq2

limma

DESeq2

limma

DESeq2

limma

DESeq2

limma

Adulthood

Acute

334

348

313

335

36

40

29

40

Latent

370

380

359

371

42

36

37

36

Chronic

394

400

380

385

38

30

21

30

Infancy

Acute

331

339

324

311

27

25

21

25

Latent

365

380

368

378

3

3

1

3

Chronic

407

419

376

395

12

15

4

15

  1. Descriptive results of two workflows of massive parallel sequencing data processing: DESeq2 and limma. The table contains count of miRNAs reaching threshold of 500 reads (both raw and normalised) in each statistical analysis. Counts of miRNAs with fold-change over 1.4, p-value below 0.05 or 0.01 and number of normalised reads above 500 are displayed for each stage of epileptogenesis in both age groups respectively.
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