Table 3 Variants in the candidate genes in TCGA CRC samples.

From: Exome sequencing of early-onset patients supports genetic heterogeneity in colorectal cancer

Gene

Variant

Age at diagnosis

CHD1L

NM_004284:p.(M383I)

66

CHD1L

NM_004284:p.(R468W)

49

ERCC6

NM_000124:p.(L224F)

70

ERCC6

NM_000124:p.(G601S)

46

ERCC6

NM_000124:p.(R683Q)

50

ERCC6

NM_000124:p.(F1437I)

43

ITGB7

NM_000889:p.(Y753C)

60

ITGB7

NM_000889:p.(Y758fs)

76

PTPN13

NM_080685:p.(S348T)

75

PTPN13

NM_080685:p.(F724L)

89

PTPN13

NM_080685:p.(R782X)

60

PTPN13

NM_080685:p.(R817C)

74

PTPN13

NM_080685:p.(E1047G)

68

PTPN13

NM_080685:p.(T1383M)

47

PTPN13

NM_080685:p.(G1420R)

74

PTPN13

NM_080685:p.(D2110G)

41

PTPN13

NM_080685:p.(R2371H)

78

PTPN13

NM_080685:p.(R2446H)

43

PTPN13

NM_080685:p.(Q2482X)

73

SPATA20

NM_022827:p.(R51X)

77

SPATA20

NM_022827:p.(V596M)

78

  1. Twenty-one variants in five of the candidate genes were found in TCGA CRC COAD/READ samples. Seven of these were found in patients under 50 years of age (in bold).