Table 1 DEGs involved in metabolic pathways. Significant differences in expression were evaluated using one-way ANOVA (ST was used as the control group, *P < 0.01).

From: mRNA-seq and miRNA-seq profiling analyses reveal molecular mechanisms regulating induction of fruiting body in Ophiocordyceps sinensis

Gene ID

Annotation

FPKM (Average value)

MC

ST

FB

MAPK-related genes

gene-G6O67_001149

ATF/CREB family transcription factor

159.450

296.989

310.307

gene-G6O67_001860

Mitogen-activated protein kinase kinase

38.493

72.839

117.395

gene-G6O67_006243

Histidine kinase

35.787

77.025

31.850

gene-G6O67_006845

Pheromone receptor

10.897

33.218

15.188

gene-G6O67_005494

Glycerol-3-phosphate dehydrogenase (NAD +)

105.461

88.457

16.160*

gene-G6O67_007807

Ras homolog gene family

7.340

12.113

5.378*

gene-G6O67_001713

Catalase

290.274*

1624.276

362.997*

Amino acid-related genes

gene-G6O67_003346

Tyrosinase

29.075*

427.065

1.401*

gene-G6O67_004157

Acetamidase

36.780*

94.229

23.372*

gene-G6O67_001432

Amidase signature domain protein

74.558

36.214

4.771*

gene-G6O67_006218

Amidase

84.452

101.630

4.214*

gene-G6O67_000733

Acetyl-CoA acetyltransferase

153.290

166.490

50.872*

gene-G6O67_001178

Glutaryl-CoA dehydrogenase

57.967

66.856

33.046

gene-G6O67_002860

Aldehyde dehydrogenase family

645.414*

1378.017

351.529*

gene-G6O67_005633

Cytochrome P450 monooxygenase

88.415

163.465

2.668*

gene-G6O67_001713

Catalase

290.274*

1624.276

362.997*

gene-G6O67_006145

Catalase-peroxidase

251.388

239.481

92.286*

Energy-related metabolism genes

gene-G6O67_000383

Isocitrate dehydrogenase

87.656

48.958

102.003*

gene-G6O67_003773

Isocitrate lyase

42.254*

67.603

13.513*

gene-G6O67_001528

Glucokinase

17.177

11.438

176.097*

gene-G6O67_001884

Transaldolase

259.266

281.600

113.116*

gene-G6O67_003014

Acyl-CoA dehydrogenase

73.135

72.973

37.604

gene-G6O67_003548

Citrate synthase

326.182

61.291

0.000

gene-G6O67_003742

NAD(P)-binding domain protein

140.674

148.164

67.100

gene-G6O67_006486

Malate dehydrogenase

788.497

1088.906

236.372*

gene-G6O67_006510

Isocitrate dehydrogenase NADP

63.750

30.549

72.962

gene-G6O67_007408

Succinate dehydrogenase cytochrome b small subunit

269.799

242.459

111.577

gene-G6O67_007964

Acyl-CoA dehydrogenase domain protein

77.659

45.968

17.089

gene-G6O67_008750

Succinyl-CoA synthetase beta chain

87.758*

209.074

26.275*

gene-G6O67_008752

Alpha subunit of GDP-forming succinate-CoA ligase

118.068

145.249

42.014*

gene-G6O67_002224

Succinate dehydrogenase iron-sulfur protein

281.527

115.061

248.025

gene-G6O67_004996

Gluconolactonase precursor

16.812

5.929

8.262*

gene-G6O67_008325

Fructose-1,6-bisphosphatase I

140.215

107.728

8.231

gene-G6O67_008067

Phosphoenolpyruvate carboxykinase

929.438

1282.465

96.630*