Table 1 Genetic polymorphisms and neutrality tests of Uranoscopus cognatus inferred from the mitochondrial DNA CO1 (534 base pairs) and nuclear DNA RAG1 (1,426 base pairs) sequences.
Region | ST | mtDNA CO1 | nuDNA RAG1 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N | Genetic polymorphism | Neutrality test | N | Genetic polymorphism | Neutrality test | |||||||||||
S | nh | H | π | Tajima’s D | Fu’s Fs | S | nh | H | π | Tajima’s D | Fu’s Fs | |||||
WCT | 1 | 17 | 2 | 2 | 0.118 | 0.0004 | − 1.504 | 0.122 | 17 | 3 | 5 | 0.728 | 0.0008 | 0.7819 | − 0.023 | |
2 | 6 | 2 | 3 | 0.600 | 0.0013 | − 1.132 | − 0.858 | 6 | 2 | 3 | 0.733 | 0.0008 | 1.393 | 0.0203 | ||
Total | 23 | 4 | 4 | 0.249 | 0.0007 | − 1.881* | − 2.270 | 23 | 3 | 5 | 0.723 | 0.0008 | 0.996 | − 0.622 | ||
ECPM | 3 | 17 | 3 | 4 | 0.493 | 0.0010 | − 1.096 | − 1.537* | 17 | 9 | 9 | 0.860 | 0.0013 | − 1.155 | − 4.374* | |
4 | 18 | 6 | 6 | 0.490 | 0.0014 | − 1.849* | − 3.313* | 18 | 7 | 8 | 0.699 | 0.0011 | − 0.778 | − 3.408* | ||
5 | 18 | 8 | 7 | 0.634 | 0.0022 | − 1.766* | − 3.296* | 11 | 4 | 4 | 0.673 | 0.0009 | − 0.249 | − 0.228 | ||
6 | 9 | 5 | 4 | 0.583 | 0.0021 | − 1.677* | − 0.822 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | ||
7 | 20 | 12 | 13 | 0.884 | 0.0032 | − 1.791* | − 11.021* | 5 | 3 | 4 | 0.900 | 0.0008 | − 1.049 | − 1.938* | ||
8 | 18 | 7 | 8 | 0.797 | 0.0024 | − 1.235 | − 4.203* | 17 | 5 | 7 | 0.772 | 0.0009 | − 0.532 | − 3.160* | ||
9 | 19 | 3 | 4 | 0.573 | 0.0013 | − 0.459 | − 0.823 | 19 | 7 | 9 | 0.731 | 0.0011 | − 0.843 | − 4.815* | ||
10 | 18 | 7 | 6 | 0.562 | 0.0016 | − 1.933* | − 2.867* | 5 | 4 | 4 | 0.900 | 0.0013 | − 0.410 | − 1.195 | ||
11 | 18 | 11 | 9 | 0.804 | 0.0034 | − 1.576 | − 4.121* | 17 | 14 | 9 | 0.868 | 0.0018 | − 1.461 | − 2.906 | ||
12 | 19 | 6 | 6 | 0.643 | 0.0017 | − 1.583* | − 2.763 | 11 | 5 | 7 | 0.818 | 0.0011 | − 0.404 | − 3.787* | ||
13 | 16 | 4 | 5 | 0.600 | 0.0013 | − 1.312 | − 2.363* | 14 | 4 | 5 | 0.593 | 0.0006 | − 0.905 | − 1.870* | ||
14 | 18 | 4 | 3 | 0.216 | 0.0008 | − 1.853* | − 0.507 | 14 | 6 | 7 | 0.692 | 0.0009 | − 1.081 | − 3.466* | ||
Total | 208 | 37 | 39 | 0.628 | 0.0019 | − 2.418* | − 57.825* | 148 | 22 | 33 | 0.749 | 0.0011 | − 1.757 | − 33.950* | ||
Overall | 231 | 38 | 43 | 0.692 | 0.0024 | − 2.278* | − 58.217* | 171 | 22 | 33 | 0.789 | 0.0011 | − 1.645 | − 33.320* | ||