Table 1 Statistics of clean reads in the eggplant transcriptomes.
Sample | raw_reads | raw_bases | clean_reads | clean_bases | valid_bases (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
F 15min_1 | 49.75M | 7.46G | 48.83M | 6.63G | 88.89 | 94.15 | 44.08 |
F 15min_2 | 43.77M | 6.57G | 42.98M | 5.84G | 88.89 | 93.84 | 43.55 |
F 15min_3 | 43.15M | 6.47G | 42.38M | 5.77G | 89.21 | 94.08 | 43.46 |
F 2min_1 | 50.03M | 7.50G | 49.08M | 6.54G | 87.16 | 93.68 | 43.82 |
F 2min_2 | 48.79M | 7.32G | 47.97M | 6.49G | 88.66 | 94.36 | 43.43 |
F 2min_3 | 49.04M | 7.36G | 48.16M | 6.52G | 88.62 | 94.20 | 48.59 |
F CK0_1 | 45.73M | 6.86G | 44.96M | 6.11G | 89.06 | 94.20 | 43.50 |
F CK0_2 | 47.44M | 7.12G | 46.49M | 6.20G | 87.17 | 93.87 | 44.36 |
F CK0_3 | 44.35M | 6.65G | 43.44M | 5.75G | 86.47 | 93.61 | 44.04 |
36 15min_1 | 43.53M | 6.53G | 42.75M | 5.81G | 89.00 | 94.33 | 46.06 |
36 15min_2 | 44.28M | 6.64G | 43.46M | 5.95G | 89.60 | 94.04 | 46.80 |
36 15min_3 | 44.47M | 6.67G | 43.65M | 5.89G | 88.30 | 94.31 | 49.09 |
36 2min_1 | 49.59M | 7.44G | 48.75M | 6.57G | 88.30 | 94.50 | 50.06 |
36 2min_2 | 43.62M | 6.54G | 42.83M | 5.73G | 87.57 | 94.07 | 43.78 |
36 2min_3 | 46.19M | 6.93G | 45.34M | 6.05G | 87.39 | 94.01 | 49.84 |
36 CK0_1 | 48.12M | 7.22G | 47.28M | 6.33G | 87.74 | 94.03 | 44.55 |
36 CK0_2 | 52.72M | 7.91G | 51.84M | 7.04G | 89.07 | 94.40 | 44.25 |
36 CK0_3 | 47.98M | 7.20G | 47.12M | 6.33G | 88.01 | 94.02 | 46.79 |
