Table 2 Allelic frequencies of non-synonymous substitutions identified in candidate genes for gene-doping control.
From: Rare and common variant discovery by whole-genome sequencing of 101 Thoroughbred racehorses
Chr | Position | Gene | Allele | Amino acid | ALT-allele |
|---|---|---|---|---|---|
REF/ALT | REF/ALT | Freq | |||
2 | 105,677,170 | FGF2 | C/A | Gln/Lys | 0.0099 |
2 | 105,677,230 | FGF2 | G/A | Glu/Lys | 0.1287 |
2 | 105,677,363 | FGF2 | T/C | Ile/Thr | 0.0198 |
2 | 105,677,447 | FGF2 | G/C | Arg/Thr | 0.0792 |
2 | 105,678,566 | FGF2 | T/C | Met/Thr | 0.1436 |
9 | 77,071,461 | ZFAT | T/C | Thr/Ala | 0.2525 |
9 | 77,165,943 | ZFAT | G/A | Thr/Met | 0.1881 |
10 | 16,083,859 | CKM | G/A | Val/Ile | 0.0099 |
11 | 15,494,450 | GH1 | G/C | Gly/Ala | 0.1188 |
20 | 43,602,385 | VEGFA | A/C | Glu/Ala | 0.0050 |
22 | 45,074,634 | PCK1 | G/A | Ala/Thr | 0.3960 |
22 | 45,075,211 | PCK1 | C/G | Pro/Arg | 0.0248 |
22 | 45,075,648 | PCK1 | A/G | Met/Val | 0.2079 |
