Table 1 Significantly associated GWAS SNPs.

From: The ABCC4 gene is associated with pyometra in golden retriever dogs

SNP Id

Chr

Bp

Allele risk/non-risk

Location in relation to ABCC4 gene

Risk allele freq. (cases)

Risk allele freq. (controls)

GWAS P value

BICF2G630333328

22

45,875,420

T/G

intron 19/30

0.21

0.05

1.24e−06

BICF2G630333353

22

45,882,260

A/G

intron 19/30

0.21

0.05

1.24e−06

BICF2G630333364

22

45,886,617

T/G

intron 19/30

0.21

0.05

1.24e−06

BICF2G630333376

22

45,892,301

G/A

intron 19/30

0.21

0.05

1.24e−06

BICF2G630333380

22

45,893,599

C/T

intron 18/30

0.21

0.05

1.24e−06

  1. The CanFam3.1 genomic coordinates are shown for the five associated GWAS SNPs reaching Bonferroni corrected significance. Allele frequency in cases and controls for the 98 cases and 96 controls is shown.
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