Table 3 Recombination test and estimation of Staphylococcus aureus.

From: Multilocus sequence analysis reveals genetic diversity in Staphylococcus aureus isolate of goat with mastitis persistent after treatment with enrofloxacin

Population(n)

Phi test

Recombination analysis

Linkage disequilibrium

theta/site

rho/site

rho/theta

LB 95%

UB 95%

IAs

P value

All (22 STs)

4.053E−5

4.854E−03

1.05E−03

2.16E−01

4.534E−04

1.698E−03

0.0052

 < 1.00E10−04

L1 (4 STs)

NA

6.849E−04

5.65E−01

826.053E+00

7.301E−04

2.777E+00

0.0001

1.98E10−02

L2 (18 STs)

5.413E−03

3.618E−03

2.26E−03

6.24E−01

5.134E+00

11.102 E+00

0.0014

 < 1.00E10−04

  1. Contains 22 Sequence types (All); Lineage 1 (L1); Lineage 2 (L2); Standard association of index (IAs); Upper bound 95% (LB); Lower bound 95% (UB).
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