Table 4 Tubulins comparison between E. focardii, E. crassus and E. octocarinatus. *NODE_87922_length_309_cov_44.0984 (fragment of 309 nt without telomeres only present in the total non-cleaned assembly).

From: The macronuclear genome of the Antarctic psychrophilic marine ciliate Euplotes focardii reveals new insights on molecular cold adaptation

Tubulin

Protein assembly code

E. crassus

E. octocarinatus

α1

Protein_13754°

Protein_27015°

18,065.g7566.t1° §

α2

Protein_13962 (94.88% of identity vs α1)

Protein_27022°

 

α3

Protein_14463 (85%)

Protein_28219°

 

α4

Protein_14635 (59%)

Protein_29453

 

α5

Protein_14449 (57%)

Protein_30084

 

α6

Protein_15234 (57%)

  

α7

Protein_13592 (54%)

  

β1

Protein_13059°

Protein_28250

8213.g27318.t1°

β2

Protein_14529°

Protein_23030

5984.g25146.t1° §

β3

Protein_14159°

Protein_27936°

4,144,198.g23194.t1

β4

 

Protein_28002

5259.g24445.t1

β5

Protein_13114

Protein_20290

6445.g25572.t1

γ1

Protein_13695°

Protein_26311°

 

γ2

* °

Protein_25799°

11,092.g1034.t1°

δ1

Protein_16384

 

24,288.g13101.t1

δ2

Protein_06776

 

30,256.g19015.t1

ε

Protein_13848

 

17,307.g6847.t1

   

2182.g10828.t1

   

29,123.g17894.t1

   

29,737.g18500.t1

   

414,497.g23602.t1

α-like

Protein_09756 (similar to Protein_13962)

Protein_11578 (similar to Protein_15234)

Protein_12280 (similar to Protein_15234)

Protein_12357 (similar to Protein_13962)

Protein_13335 (similar to Protein_15234)

Protein_14210 (similar to Protein_15234 frag)

Protein_16674 (similar to Protein_13754)

 

6 proteins

β-like

Protein_11303 (similar to Protein_14529)

Protein_15589 (similar to Protein_14159)

 

6 proteins

  1. Protein sequence already deposited in UniProtKB (the ID numbers of E. crassus proteins are: Q8MM87 for TBα1, Q8MU38 for TBα2, Q8MU39 for TBα3, P20365 for TBβ3, P54403 for TBγ1 and P54404 for TBγ2; the ID numbers of E. octocarinatus proteins are: Q08114 for TBα1, Q08115 for TBβ1, Q0GGY3 for TBβ2 and P90548 for TBγ2).
  2. §Contig contains a further sequence portion (in comparison with that deposited in UniProtKB) most likely derived by an assembling or gene prediction error.