Table 1 H-bonds (HBs) comparison in APO-EcAII and EcAII-ASP. In bold HB conserved in APO-EcAII and EcAII-ASP, in italics HBs involving residues in the same region both in APO-EcAII and EcAII-ASP, and, in bolditalics HBs different in APO-EcAII and EcAII-ASP.

From: Revealing Escherichia coli type II l-asparaginase active site flexible loop in its open, ligand-free conformation

HOLO

APO

 

1st Res name

1st Res number

1st Res name

1st Res number

2nd Res name

2nd Res number

2nd Res name

2nd Res number

GLY

16

PRO

117

GLY

16

PRO

117

G16

    

GLY

16

SER

118

GLY

16

THR

119

GLY

16

THR

119

    

GLY

17

THR

119

G17

    

GLY

17

ALA

38

    

ASP

18

THR

119

D18

    

SER

19

THR

119

S19

    

SER

19

SER

120

    

ALA

20

THR

119

A20

ALA

20

SER

120

ALA

20

SER

120

ALA

20

MET

121

ALA

20

MET

121

THR

21

SER

120

THR

21

SER

120

T21

    

THR (A)

21

GLY (B)

17 (B)

LYS

22

ASN

184 (+ chain)

LYS

22

ASN

184

K22

    

SER

23

ARG

116

S23

    

SER

23

SER

120

    

ASN

24

ARG

116

N24

    

ASN

24

GLY

15

ASN

24

ALA

282 (+ chain)

    

ASN

24

GLU

283 (+ chain)

    
    

TYR

25

MET

115

Y25

    

TYR

25

ARG

116

    

TYR

25

PRO

117

TYR

25

GLY

16

TYR

25

GLY

15

TYR

25

GLY

17

    
    

TYR

25

ALA

38

    

THR

26

PRO

117

T26

    

THR

26

SER

118

THR

26

GLY

15

THR

26

GLY

15

VAL

27

GLY

11

VAL

27

GLY

11

V27

    

VAL

27

SER

118

VAL

27

THR

12

VAL

27

THR

12

VAL

27

GLY

15

VAL

27

GLY

15

    

VAL

27

ALA

14

VAL

27

GLY

57

    
    

VAL

27

ASN

34

GLY

28

GLY

10

GLY

28

THR

12

G28

GLY

28

GLY

11

GLY

28

GLY

11

GLY

28

ALA

14

GLY

28

ALA

14

GLY

28

GLY

15

GLY

28

GLY

15

    

GLY

28

SER

118

GLY

28

ASN

55

     

GLY

28

ILE

56

    

LYS

29

ALA

14

LYS

29

GLY

11

K29

LYS

29

GLY

15

    

VAL

30

ALA

14

VAL

30

GLY

11

V30

    

VAL

30

THR

12

    

VAL

30

GLY

15

    

GLY

31

GLY

10

G31

    

GLY

31

GLY

11

    

GLY

31

THR

12

    

VAL

32

GLY

11

V32

    

VAL

32

THR

12

VAL

32

GLY

50

VAL

32

GLY

50

    

VAL

32

GLN

52

VAL

32

ALA

8

VAL

32

ALA

8

THR

12

ALA

114

THR

12

LEU

35

T12

THR

12

PRO

117

    

THR

89

GLY

113

THR

89

GLY

113

T89