Table 5 Classification of SNPs from RNA-Seq included in the array, considering the annotation of 4093 SNPs from pacu and 294 SNPs from tambaqui.

From: Development of a multi-species SNP array for serrasalmid fish Colossoma macropomum and Piaractus mesopotamicus

Category

Number of SNPs

Pacu (%)

Tambaqui (%)

Intergenic

2047 (48.3)

208 (69.8)

UTR 3′ prime

1202 (28.4)

17 (5.7)

UTR 5′ prime

284 (6.7)

14 (4.7)

Exon

Synonymous SNP

490 (11.6)

59 (19.8)

Missense SNP

215 (5.0)

–

Total of effects

4238 (100)

298 (100)

  1. Percentage values are between parenthesis.
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