Table 2 Nucleotide composition of the mitochondrial genomes of different treeshrew mtDNA.
Species name | Size (bp) | A% | T% | G% | C% | G + C% | AT‐skew | GC‐skew |
|---|---|---|---|---|---|---|---|---|
Complete mitogenome | ||||||||
T. nicobarica | 17,164 | 32.56 | 25.74 | 14.54 | 27.13 | 41.70 | 0.11 | − 0.30 |
T. belangeri | 16,754 | 32.70 | 26.55 | 14.37 | 26.38 | 40.75 | 0.10 | − 0.29 |
T. minor | 16,187 | 32.06 | 26.83 | 14.77 | 26.32 | 41.09 | 0.08 | − 0.28 |
T. montana | 16,183 | 32.07 | 26.63 | 14.79 | 26.52 | 41.30 | 0.09 | − 0.28 |
T. splendidula | 16,189 | 32.33 | 26.72 | 14.54 | 26.17 | 40.71 | 0.09 | − 0.28 |
T. tana | 16,186 | 32.52 | 27.20 | 14.38 | 25.89 | 40.28 | 0.08 | − 0.28 |
Protein-coding genes (PCGs) | ||||||||
T. nicobarica | 11,410 | 31.60 | 26.32 | 13.31 | 28.74 | 42.05 | 0.09 | − 0.36 |
T. belangeri | 11,394 | 30.50 | 28.30 | 14.30 | 26.91 | 41.21 | 0.04 | − 0.31 |
T. minor | 11,387 | 30.24 | 28.45 | 14.49 | 26.82 | 41.31 | 0.03 | − 0.30 |
T. montana | 11,389 | 30.25 | 28.22 | 14.49 | 27.04 | 41.53 | 0.03 | − 0.30 |
T. splendidula | 11,362 | 30.50 | 28.37 | 14.33 | 26.81 | 41.14 | 0.04 | − 0.30 |
T. tana | 11,389 | 30.89 | 28.72 | 14.00 | 26.39 | 40.39 | 0.04 | − 0.31 |
tRNA genes (tRNAs) | ||||||||
T. nicobarica | 1497 | 34.06 | 26.78 | 17.03 | 22.11 | 39.14 | 0.11 | − 0.12 |
T. belangeri | 1564 | 31.91 | 29.35 | 20.33 | 18.41 | 38.75 | 0.04 | 0.05 |
T. minor | 1493 | 30.94 | 30.01 | 20.76 | 18.29 | 39.05 | 0.02 | 0.06 |
T. montana | 1496 | 31.15 | 29.95 | 20.52 | 18.38 | 38.90 | 0.02 | 0.05 |
T. splendidula | 1496 | 31.75 | 30.21 | 20.12 | 17.91 | 38.03 | 0.02 | 0.06 |
T. tana | 1497 | 32.00 | 29.86 | 19.97 | 18.17 | 38.14 | 0.03 | 0.05 |
rRNA genes (rRNAs) | ||||||||
T. nicobarica | 2519 | 35.84 | 22.70 | 18.69 | 22.74 | 41.44 | 0.22 | − 0.09 |
T. belangeri | 2520 | 36.11 | 22.86 | 18.73 | 22.30 | 41.03 | 0.22 | − 0.09 |
T. minor | 2516 | 35.41 | 23.21 | 18.64 | 22.73 | 41.38 | 0.21 | − 0.10 |
T. montana | 2508 | 35.33 | 23.01 | 18.74 | 22.93 | 41.67 | 0.21 | − 0.10 |
T. splendidula | 2514 | 35.52 | 23.31 | 18.70 | 22.47 | 41.17 | 0.21 | − 0.09 |
T. tana | 2510 | 35.54 | 23.86 | 18.53 | 22.07 | 40.60 | 0.20 | − 0.09 |
Control regions (CRs) | ||||||||
T. nicobarica | 1757 | 33.23 | 25.72 | 14.34 | 26.63 | 40.97 | 0.12 | − 0.30 |
T. belangeri | 1350 | 34.37 | 28.37 | 13.11 | 24.15 | 37.26 | 0.10 | − 0.30 |
T. minor | 788 | 30.20 | 29.95 | 16.50 | 23.35 | 39.85 | 0.00 | − 0.17 |
T. montana | 790 | 30.51 | 29.11 | 16.46 | 23.92 | 40.38 | 0.02 | − 0.18 |
T. splendidula | 778 | 31.75 | 29.18 | 16.32 | 22.75 | 39.07 | 0.04 | − 0.16 |
T. tana | 789 | 30.42 | 28.90 | 16.48 | 24.21 | 40.68 | 0.03 | − 0.19 |