Figure 3 | Scientific Reports

Figure 3

From: Metagenomic sequencing for detection and identification of the boxwood blight pathogen Calonectria pseudonaviculata

Figure 3

Krona plots showing the fraction of reads identified at the species, species complex, or genus rank as a percentage of the sequencing reads assigned to the family Nectriaceae using the tool Kraken 2 and a database of 29 genomes. The plots on the left display BLASTN results and the ones on the right Kraken 2 results. Each color represents a species, species complex, or genus. (A) Results of G10, the sample processed by OmniPrep after homogenization in liquid nitrogen. (B) Results of G12, the sample processed by ZymoBIOMICS DNA Miniprep Kit after homogenization in liquid nitrogen (see Table 1).

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