Table 3 Percentage of Cps based on Jaccard similarity obtained with sourmash and Cps hits obtained with BLASTN.
Reference genome | Accession number | G10 Cps reads | G11 Cps reads | G12 Cps reads | Assembled Cps genome | |
|---|---|---|---|---|---|---|
Similarity (%) by sourmash | Similarity (%) by sourmash | Similarity (%) by sourmash | Similarity (%) by sourmash | Number of hits by BLASTN | ||
CBS139395 | GCA_004380915.1 | 17.47 | 19.11 | 14.21% | 72.27% | 621 |
CBS139394 | GCA_001696505.1 | 17.30 | 18.93 | 14.01% | 72.65% | 125 |
CB002 | GCA_006505905.1 | 17.11 | 18.72 | 13.83% | 72.53% | 3 |
GCA_004141935.1 | 17.11 | 18.72 | 13.83% | 72.53% | ||
CT13 | GCA_004380985.1 | 16.65 | 18.26% | 13.36% | 72.12% | 217 |
CBS14417 | GCA_004381005.1 | 16.51 | 18.10% | 13.23% | 72.02% | 43 |
ODA1 | GCA_004382225.1 | 15.69 | 17.36% | 12.53% | 68.81% | 31 |
NC-BB1 | GCA_004381035.1 | 13.85 | 15.54% | 11.02% | 61.20% | 5 |
ICMP14368 | GCA_004382245.1 | 10.73 | 12.56% | 8.48% | 48.09% | 5 |
