Table 2 Nucleotide and amino acid sequence identity between 115V3/YN/CHN/2019 and the prototype E9 and other prototype echovirus strains in all sequenced genomic regions.
Genomic region | Prototype echovirus 9 | Other echovirus 9 | ||
|---|---|---|---|---|
% nucleotide identity | % amino acid identity | % nucleotide identity | % amino acid identity | |
5′-UTR | 77.9 | 83.7–94.0 | ||
VP4 | 83.1 | 94.2 | 74.9–93.2 | 91.3–98.6 |
VP2 | 80.7 | 96.6 | 82.5–94.1 | 88.1–99.6 |
VP3 | 79.9 | 96.7 | 76.2–91.8 | 90.4–99.2 |
VP1 | 80.7 | 96.3 | 75.1–94.3 | 88.1–99.6 |
2A | 78.8 | 93.8 | 78.0–92.1 | 91.0–95.8 |
2B | 78.9 | 92.9 | 77.2–79.9 | 90.9–94.9 |
2C | 80.0 | 97.3 | 80.4–86.7 | 96.6–98.8 |
3A | 77.9 | 95.5 | 79.4–84.6 | 95.5–98.9 |
3B | 77.3 | 95.5 | 75.8–84.8 | 84.6–90.9 |
3C | 78.1 | 96.7 | 79.6–85.6 | 95.6–98.1 |
3D | 79.2 | 96.8 | 79.2–85.0 | 96.3–98.1 |
3′-UTR | 83.5 | 68.9–84.9 | ||
Genome | 79.0 | 94.4 | 80.5–88.7 | 93.5–97.6 |
