Table 1 Nucleotide diversity (π), Tajima’s D and weighted Fst estimated in the Colombian coconut diversity panel in relation to different genotypes identified.

From: Genome-wide diversity analysis to infer population structure and linkage disequilibrium among Colombian coconut germplasm

 

N

SNPs

π

D

Fst

  

Origin

    

Pacific

  

Atlantic

29

1377

0.337

0.947

0.501

  

Pacific

51

8038

0.324

1.124

   
     

Pacific 2

Atlantic

Both coasts

Genotypes

Pacific 1

16

5815

0.328

0.510

0.537

0.568

0.488

Pacific 2

35

6543

0.239

0.211

 

0.529

0.478

Atlantic

29

1377

0.337

0.947

  

0.319

Both Coasts

27

16,629

0.373

0.711

   
  1. N number of accessions, SNPs number of SNPs, π nucleotide diversity, D Tajima’s D statistics (Weir and Cockerham 1984).
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