Figure 2
From: Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing diagnostics
Pathogen genome alignment. Coverage density plot of sequencing reads from respective sample and control detected in PaRCA aligned to reference genomes of HSV1 (a), VZV (b), JCV (c), S. pneumoniae (d) and EBV (e, f). Number of reads (y-axis) at each nucleotide position of the genome (x-axis) depicted in blue. Dark blue represents peak, bright blue average and light blue minimum coverage for respective sections of the genome.
