Table 1 Contingency table.
Gene-set (annotated) | DEGs | Not DEGs | Marginal total |
|---|---|---|---|
Si (ith GO term/KEGG-pathway) | ki | Mi − ki | Mi |
\({S}_{{\varvec{i}}}^{c}\)(Complement of Si) | n − ki | N − Mi − n + ki | N − Mi |
Marginal total | n | N − n | N (Grand total) |
Gene-set (annotated) | DEGs | Not DEGs | Marginal total |
|---|---|---|---|
Si (ith GO term/KEGG-pathway) | ki | Mi − ki | Mi |
\({S}_{{\varvec{i}}}^{c}\)(Complement of Si) | n − ki | N − Mi − n + ki | N − Mi |
Marginal total | n | N − n | N (Grand total) |