Table 4 Primer sequences utilized for rRT-PCR analysis of targeted gene expression.

From: Probiotics-loaded nanoparticles attenuated colon inflammation, oxidative stress, and apoptosis in colitis

Target gene

Primer sequence (5′–3′)

Accession No./Reference

iNOS

F-ACCTTCCGGGCAGCCTGTGA

R-CAAGGAGGGTGGTGCGGCTG-3′

NM_012611

COX-2

F-GCTCAGCC ATACAGCAAATCC

R-GGGAGTCGGGCAAT CATCAG

NM_017232

Caspase-3

F-GCAGCTAACCTCAGAGAGACATTC

R-ACGAGTAAGGTCATTTTTATTCCTGACTT

NM_012922

Bcl-2

F-TGCGCTCAGCCCTGTG

R-GGTAGCGACGAGAGAAGTCATC

NM_016993

BAX

F-CAAGAAGCTGAGCGAGTGTCT

R-CAATCATCCTCTGCAGCTCCATATT

NM_017059

Cytochrome C

F-TTTGAATTCCTCATTAGTAGCTTTTTTGG

R-CCATCCCTACGCATCCTTTAC

NM_012839

IL-1β

F-TGACAGACCCCAAAAGATTAAGG

R-CTCATCTGGACAGCCCAAGTC

NM_031512.2

IL-6

F-CCACCAGGAACGAAAGTCAAC

R-TTGCGGAGAGAAACTTCATAGCT

NM_012589.2

IL-10

F-GCCCAGAAATCAAGGAGCATT

R-CAGCTGTATCCAGAGGGTCTTCA

L02926.1

TNFα

F-CAGCCGATTTGCCATTTCA

R-AGGGCTCTTGATGGCAGAGA

L19123.1

TGF-β

F-CCAGCCGCGGGACTCT

R-TTCCGTTTCACCAGCTCCAT

NM_021578.2

β-actin

F-CGCAGTTGGTTGGAGCAAA

R-ACAATCAAAGTCCTCAGCCACAT

V01217.1

GAPDH

F-TGCTGGTGCTGAGTATGTCG-3′

R-TTGAGAGCAATGCCAGCC-3′

NM_017008

Bacteroides spp.

F:GAG AGG AAG GTC CCC CAC

R:CGC TAC TTG GCT GGT TCA G

Layton et al.94

Firmicutes spp. Guo et al. 2008

F-GGAGYATGTGGTTTAATTCGAAGCA

R-AGCTGACGACAACCATGCAC

Guo et al.95

Enterobacteriaceae

F-CATTGACGTTACCCGCAGAAGAAGC

R-CTCTACGAGACTCAAGCTTGC

Bartosch et al.96

Bifidobacterium spp.

F-GCG TCC GCT GTG GGC

R-CTT CTC CGG CATGGT GTTG

Requena et al.97

Bacillus spp.

F-GCA ACG AGC GCA ACC CTT GA

R-TCA TCC CCA CCT TCC TCC GGT

Zhang et al.37

  1. iNOS inducible nitric oxide synthase, COX-2 cyclo-oxygenase-2, IL interleukin, TNFα tumor necrosis factor α, TGF-β transforming growth factor-beta, COX-2 cyclooxygenase-2, Bcl-2 B cell lymphoma-2, Bax Bcl-2 associated x protein.