Table 3 hsa-miR-125 family in deep sequencing using four different methods for differential expression analysis.

From: Identification of microRNAs associated with human fragile X syndrome using next-generation sequencing

 

Mir

U/D

LFC

Limma-Trend

LFC

Limma-Voom

LFC

edgeR

LFC

DESeq2

1

125a-5p

Down

2.27

4.66E−06

2.3

2.72E−06

1.97

2.67E−06

1.54

0.00030171

2

125b-2-3p

Down

0.6

2.42E−05

0.82

0.0540679

3.81

2.60E−06

1.9

0.01564258

3

125a-3p

Down

0.4

0.00922126

0.3

0.43746489

1.43

0.01400016

1.01

0.13573104

4

125b-5p

Down

0.31

0.29037969

0.29

0.4493121

0.2

0.58630045

− 1.27

0.95661198

  1. U/D up /down, LFC log fold change.
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