Table 2 Variable nucleotide sites in five cpDNA regions of Rumex crispus, R. obtusifolius, R. japonicus and putative hybrids.
Haplotype | Taxon | Variable nucleotide sites in alignment | ||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
matK | rbcL-accD IGS | trnK-rps16 IGS | ycf6-psbM IGS | psbA-trnH IGS | ||||||||||||||||||||||||||||||||||||||
0 5 4 4 | 0 6 3 2 | 1 4 1 1 | 2 4 1 1 | 3 4 1 1 | 4 4 1 1 | 5 4 1 1 | 1 9 2 1 | 6 4 6 1 | 1 9 0 2 | 6 1 2 2 | 1 9 0 3 | 2 9 0 3 | 3 9 0 3 | 4 9 0 3 | 5 9 0 3 | 6 9 0 3 | 3 8 1 3 | 8 1 3 3 | 6 2 3 3 | 6 5 5 3 | 7 5 5 3 | 8 5 5 3 | 9 5 5 3 | 0 6 5 3 | 6 6 7 3 | 8 6 7 3 | 9 6 7 3 | 0 7 7 3 | 1 7 7 3 | 3 7 7 2 | 3 7 7 3 | 4 7 7 3 | 5 7 7 3 | 6 7 7 3 | 3 1 8 3 | 8 1 8 3 | 2 6 8 3 | 4 8 8 3 | 5 0 9 3 | 7 0 9 3 | ||
C1 | R. crispus, R. japonicus, R. crispus x R. obtusifolius | T | G | – | – | – | – | – | – | G | T | T | – | – | – | – | – | – | T | A | A | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | A | T | G | T | T | A |
C2 | R. obtusifolius, R. crispus x R. obtusifolius | T | T | T | T | G | C | G | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
C3 | R. crispus, R. crispus x R. obtusifolius | T | T | – | – | – | – | – | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | C | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
C4 | R. crispus, R. crispus x R. obtusifolius | T | T | – | – | – | – | – | – | A | T | C | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | – | – | – | – | – | – | – | – | – | G | – | G | G | T | A |
C5 | R. crispus, R. crispus x R. obtusifolius | A | G | – | – | – | – | – | T | A | G | T | A | T | A | T | G | T | C | G | G | – | – | – | – | – | A | T | G | T | T | A | T | G | A | G | G | – | A | G | G | G |
C6 | R. japonicus | A | G | – | – | – | – | – | T | A | G | T | A | T | A | T | G | T | C | G | G | C | A | T | T | A | A | T | G | T | T | A | T | G | A | G | G | – | A | G | G | G |
